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Open AccessJournal ArticleDOI

Site-specific C-terminal and internal loop labeling of proteins using sortase-mediated reactions

TLDR
In this paper, the authors describe the expression and purification conditions for two sortase A enzymes that have different recognition sequences and provide a protocol that allows the functionalization of any given protein at its C terminus, or, for select proteins, at an internal site.
Abstract
Methods for site-specific modification of proteins should be quantitative and versatile with respect to the nature and size of the biological or chemical targets involved. They should require minimal modification of the target, and the underlying reactions should be completed in a reasonable amount of time under physiological conditions. Sortase-mediated transpeptidation reactions meet these criteria and are compatible with other labeling methods. Here we describe the expression and purification conditions for two sortase A enzymes that have different recognition sequences. We also provide a protocol that allows the functionalization of any given protein at its C terminus, or, for select proteins, at an internal site. The target protein is engineered with a sortase-recognition motif (LPXTG) at the place where modification is desired. Upon recognition, sortase cleaves the protein between the threonine and glycine residues, facilitating the attachment of an exogenously added oligoglycine peptide modified with the functional group of choice (e.g., fluorophore, biotin, protein or lipid). Expression and purification of sortase takes ∼3 d, and sortase-mediated reactions take only a few minutes, but reaction times can be extended to increase yields.

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Posted ContentDOI

Molecular mechanism of cell-cell adhesion mediated by cadherin-23

TL;DR: A novel antiparallel-binding interface of Cdh23 homodimer in solution is identified by combining biophysical and computational methods, in-vitro cell-binding, and mutational modifications which are likely to have far-reaching applications in the fields of mechanobiology and cancer.
Dissertation

Role of Glycosylation of IL-1ra on its Binding to IL-1R1

TL;DR: This research attempts to study the effects of the glycosylation of IL-1ra with its binding to the interleukin 1 receptor type 1 (IL-1R1) using both biolayer interferometry and size exclusion chromatography.
Patent

Novel nucleic acid modifier

TL;DR: In this paper, the authors present a set of small molecules that induce double-strand breaks, enhance cellular permeability, inhibit NHEJ and activate HDR, as well as methods of using and delivering such systems.
DissertationDOI

A chemoenzymatic strategy for protein-nanocellulose conjugates

TL;DR: It is described a chemoenzymatic method for selectively conjugating proteins bearing aldehyde functionalities to crystalline nanocellulose and an insight into this method is provided.
Posted ContentDOI

Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes

TL;DR: In this article, a structural model for the active, monomeric form of S. pneumoniae SrtA was proposed and the C-terminus and three others of {beta}7-{beta}8 loop chimeras from S. pyogenes and S. agalactiae were solved.
References
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Journal ArticleDOI

HaloTag: A Novel Protein Labeling Technology for Cell Imaging and Protein Analysis

TL;DR: The utility of this modular protein tagging system for cellular imaging and protein immobilization is demonstrated by analyzing multiple molecular processes associated with NF-kappaB-mediated cellular physiology, including imaging of subcellular protein translocation and capture of protein--protein and protein--DNA complexes.
Journal ArticleDOI

A general method for the covalent labeling of fusion proteins with small molecules in vivo

TL;DR: A general method for the covalent labeling of fusion proteins in vivo that complements existing methods for noncovalentlabeling of proteins and that may open up new ways of studying proteins in living cells is described.
Journal ArticleDOI

Staphylococcus aureus Sortase, an Enzyme that Anchors Surface Proteins to the Cell Wall

TL;DR: The protein specified by srtA, sortase, may be a useful target for the development of new antimicrobial drugs.
Journal ArticleDOI

An Engineered Protein Tag for Multiprotein Labeling in Living Cells

TL;DR: The generation of an AGT-based tag is reported, named CLIP-tag, which reacts specifically with O2-benzylcytosine derivatives, which is derived from the human DNA repair protein O6-alkylguanine-DNA alkyltransferase (AGT).
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