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Site-specific C-terminal and internal loop labeling of proteins using sortase-mediated reactions

TLDR
In this paper, the authors describe the expression and purification conditions for two sortase A enzymes that have different recognition sequences and provide a protocol that allows the functionalization of any given protein at its C terminus, or, for select proteins, at an internal site.
Abstract
Methods for site-specific modification of proteins should be quantitative and versatile with respect to the nature and size of the biological or chemical targets involved. They should require minimal modification of the target, and the underlying reactions should be completed in a reasonable amount of time under physiological conditions. Sortase-mediated transpeptidation reactions meet these criteria and are compatible with other labeling methods. Here we describe the expression and purification conditions for two sortase A enzymes that have different recognition sequences. We also provide a protocol that allows the functionalization of any given protein at its C terminus, or, for select proteins, at an internal site. The target protein is engineered with a sortase-recognition motif (LPXTG) at the place where modification is desired. Upon recognition, sortase cleaves the protein between the threonine and glycine residues, facilitating the attachment of an exogenously added oligoglycine peptide modified with the functional group of choice (e.g., fluorophore, biotin, protein or lipid). Expression and purification of sortase takes ∼3 d, and sortase-mediated reactions take only a few minutes, but reaction times can be extended to increase yields.

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A ribosome-associated chaperone enables substrate triage in a cotranslational protein targeting complex.

TL;DR: This work establishes a molecular model for how NAC acts as a triage factor to prevent protein mislocalization, and demonstrates how the macromolecular crowding of RPBs at the ribosome exit site enhances the fidelity of substrate selection into individual protein biogenesis pathways.
Journal ArticleDOI

In vivo detection of antigen-specific CD8+ T cells by immuno-positron emission tomography.

TL;DR: It is shown that synTacs, when labeled with positron-emitting isotopes, can non-invasively image antigen-specific CD8 T cells in vivo, which may serve prognostic and diagnostic roles and help evaluate the efficacy of immune interventions and improve mechanistic understanding of immune responses.
Journal ArticleDOI

Chaperones directly and efficiently disperse stress-triggered biomolecular condensates

TL;DR: It is shown that the yeast disaggregation system directly disperses heat-induced biomolecular condensates of endogenous poly(A)-binding protein (Pab1) orders of magnitude more rapidly than aggregates of the most commonly used misfolded model substrate, firefly luciferase.
Journal ArticleDOI

Fluorescence Correlation Spectroscopy Reveals Efficient Cytosolic Delivery of Protein Cargo by Cell-Permeant Miniature Proteins.

TL;DR: FCS is used to determine with precision and accuracy the relative efficiencies with which seven different previously reported “cell-penetrating peptides” (CPPs) transport a model protein cargo—the self-labeling enzyme SNAP-tag—beyond endosomal membranes and into the cytosol.
Journal ArticleDOI

Aligning physics and physiology: Engineering antibodies for radionuclide delivery.

TL;DR: The physical properties of radionuclides (positron, gamma, beta, alpha, and Auger emitters) with antibodies and fragments are discussed and recent advances of engineered antibodies and fragment in preclinical and clinical development for imaging and therapy are highlighted.
References
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Journal ArticleDOI

HaloTag: A Novel Protein Labeling Technology for Cell Imaging and Protein Analysis

TL;DR: The utility of this modular protein tagging system for cellular imaging and protein immobilization is demonstrated by analyzing multiple molecular processes associated with NF-kappaB-mediated cellular physiology, including imaging of subcellular protein translocation and capture of protein--protein and protein--DNA complexes.
Journal ArticleDOI

A general method for the covalent labeling of fusion proteins with small molecules in vivo

TL;DR: A general method for the covalent labeling of fusion proteins in vivo that complements existing methods for noncovalentlabeling of proteins and that may open up new ways of studying proteins in living cells is described.
Journal ArticleDOI

Staphylococcus aureus Sortase, an Enzyme that Anchors Surface Proteins to the Cell Wall

TL;DR: The protein specified by srtA, sortase, may be a useful target for the development of new antimicrobial drugs.
Journal ArticleDOI

An Engineered Protein Tag for Multiprotein Labeling in Living Cells

TL;DR: The generation of an AGT-based tag is reported, named CLIP-tag, which reacts specifically with O2-benzylcytosine derivatives, which is derived from the human DNA repair protein O6-alkylguanine-DNA alkyltransferase (AGT).
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