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Journal ArticleDOI

The N-terminal module of HPV16 E7 is an intrinsically disordered domain that confers conformational and recognition plasticity to the oncoprotein.

Maria Garcia-Alai, +2 more
- 23 Aug 2007 - 
- Vol. 46, Iss: 37, pp 10405-10412
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TLDR
The HPV16 E7 oncoprotein is an extended dimer, with a stable and cooperative fold, but that displays properties of "natively unfolded" proteins, which allow adaptation to a variety of protein targets and expose the PEST degradation sequence that regulates its turnover in the cell.
Abstract
The HPV16 E7 oncoprotein is an extended dimer, with a stable and cooperative fold, but that displays properties of “natively unfolded” proteins. Two regions of conserved sequence are found in E7 proteins, where the N-terminus (1−40) includes the retinoblastoma tumor suppressor binding and casein kinase II phosphorylation sites. A fragment containing the highly acidic N-terminal half shows an apparently disordered conformation by far-UV−circular dichroism (CD) at neutral pH, and its hydrodynamic radius is much larger than a neutral peptide of the same length. Trifluoroethanol and micellar concentrations of sodium dodecyl sulfate stabilize a much more helical structure at pH 4.0 than at pH 7.5, while submicellar concentrations of the detergent yield a β-strand. The shape, pH, and temperature dependence of the CD spectrum at pH 7.5 are indicative of a poly proline type II structure. This structure is stabilized by phosphorylation, which would translate into increased transforming activity in the cell. Thus, ...

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Citations
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Journal ArticleDOI

The papillomavirus E7 proteins.

TL;DR: E7 proteins encoded by the cancer-associated alpha human papillomaviruses have potent transforming activities, which together with E6, are necessary but not sufficient to render their host squamous epithelial cell tumorigenic.
Journal ArticleDOI

Role of Intrinsic Protein Disorder in the Function and Interactions of the Transcriptional Coactivators CREB-binding Protein (CBP) and p300

TL;DR: The functional diversity of the CBP/p300 interactome provides an excellent example of the power of intrinsic disorder to facilitate the complexity of living systems.
Journal ArticleDOI

Structural disorder in viral proteins

TL;DR: This paper presents a meta-modelling system that automates the very labor-intensive and therefore time-heavy and therefore expensive and expensive process of manually cataloging and cataloging the components of a molecule.
Book ChapterDOI

Circular dichroism techniques for the analysis of intrinsically disordered proteins and domains.

TL;DR: This chapter presents the basic methodology for performing Far-UV CD measurements on a protein of interest and for identifying and characterizing intrinsically disordered regions, and several protocols for the analysis of residual secondary structure present in the protein under study.
References
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Journal ArticleDOI

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm.

TL;DR: Many proteins that lack intrinsic globular structure under physiological conditions have now been recognized, and it appears likely that their rapid turnover, aided by their unstructured nature in the unbound state, provides a level of control that allows rapid and accurate responses of the cell to changing environmental conditions.
Journal ArticleDOI

Complex formation of human papillomavirus E7 proteins with the retinoblastoma tumor suppressor gene product.

TL;DR: The E7 proteins encoded by the human papillomaviruses associated with anogenital lesions share significant amino acid sequence homology and were assessed for their ability to form complexes with the retinoblastoma tumor suppressor gene product (p105‐RB).
Journal ArticleDOI

Intrinsic disorder in cell-signaling and cancer-associated proteins.

TL;DR: The data suggest that intrinsically unstructured proteins play key roles in cell-signaling, regulation and cancer, where coupled folding and binding is a common mechanism.
Journal ArticleDOI

Mechanisms of Human Papillomavirus-Induced Oncogenesis

TL;DR: Papillomaviruses are small nonenveloped viruses with 55-nm-diameter icosahedral capsids that contain double-stranded DNA genomes of approximately 8,000 bp that infect squamous epithelia and cause the generation of warts.
Journal ArticleDOI

What does it mean to be natively unfolded

TL;DR: It appeared that natively unfolded proteins are characterized by low overall hydrophobicity and large net charge, and possess hydrodynamic properties typical of random coils in poor solvent, or premolten globule conformation.
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