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Open AccessJournal ArticleDOI

Thermodynamics of Water Entry in Hydrophobic Channels of Carbon Nanotubes

TLDR
The recently developed two phase thermodynamics method is used to compute translational and rotational entropies of confined water molecules inside single-walled carbon nanotubes and shows that the increase in energy of a water molecule inside the nanotube is compensated by the gain in its rotational entropy.
Abstract
Experiments and computer simulations demonstrate that water spontaneously fills the hydrophobic cavity of a carbon nanotube. To gain a quantitative thermody- namic understanding of this phenomenon, we use the recently developed Two Phase Thermodynamics (2PT) method to compute translational and rotational entropies of confined water molecules inside single-walled carbon nanotubes and show that the increase in energy of a water molecule inside the nanotube is compensated by the gain in its rotational entropy. The confined water is in equilibrium with the bulk wa- ter and the Helmholtz free energy per water molecule of confined water is the same as that in the bulk within the accuracy of the simulation results. A comparison of translational and rotational spectra of water molecules confined in carbon nanotubes with that of bulk water shows significant shifts in the positions of the spectral peaks that are directly related to the tube radius.

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Citations
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疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

宁北芳, +1 more
TL;DR: PfPMP1)与感染红细胞、树突状组胞以及胎盘的单个或多个受体作用,在黏附及免疫逃避中起关键的作�ly.
Journal ArticleDOI

Entropy and the driving force for the filling of carbon nanotubes with water

TL;DR: Simulations with structureless coarse-grained water models reveal that the observed free energies and sequence of transitions arise from the tetrahedral structure of liquid water, a broad theoretical basis for understanding water transport through CNTs and other nanostructures important in nanofluidics, nanofiltrations, and desalination.
Journal ArticleDOI

Confined Water: Structure, Dynamics, and Thermodynamics

TL;DR: The relatively simple SPC/E water model yields results in close agreement with those obtained from polarizable water models, and the structure and thermodynamics of water confined in the slit pore between two GO sheets with both oxidized and reduced parts are provided.
Book

Water in Biological and Chemical Processes: From Structure and Dynamics to Function

TL;DR: Water in Biology: Dynamical View and Function: 6. Biological water 7. Explicit role of water in biological functions 8. Hydration of proteins 9. Can we understand protein hydration layer: lessons from computer simulations as mentioned in this paper.
Journal ArticleDOI

Water in Carbon Nanotubes: The Peculiar Hydrogen Bond Network Revealed by Infrared Spectroscopy

TL;DR: The first infrared study of water uptake at controlled vapor pressure in single walled carbon nanotubes with diameters ranging from 0.7 to 2.1 nm is reported, revealing a predominant contribution of loose H bonds even for fully hydrated states, irrespective of the nanotube size.
References
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Journal ArticleDOI

VMD: Visual molecular dynamics

TL;DR: VMD is a molecular graphics program designed for the display and analysis of molecular assemblies, in particular biopolymers such as proteins and nucleic acids, which can simultaneously display any number of structures using a wide variety of rendering styles and coloring methods.

疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

宁北芳, +1 more
TL;DR: PfPMP1)与感染红细胞、树突状组胞以及胎盘的单个或多个受体作用,在黏附及免疫逃避中起关键的作�ly.
Journal ArticleDOI

Water conduction through the hydrophobic channel of a carbon nanotube

TL;DR: Observations suggest that carbon nanotubes, with their rigid nonpolar structures, might be exploited as unique molecular channels for water and protons, with the channel occupancy and conductivity tunable by changes in the local channel polarity and solvent conditions.
Journal ArticleDOI

Formation of ordered ice nanotubes inside carbon nanotubes.

TL;DR: Simulations of the behaviour of water encapsulated in carbon nanotubes suggest the existence of a variety of new ice phases not seen in bulk ice, and of a solid–liquid critical point beyond which the distinction between solid and liquid phases disappears.
Journal ArticleDOI

A molecular jump mechanism of water reorientation.

TL;DR: Using numerical simulations, support is found for a pathway in which the rotating water molecule breaks a hydrogen bond with an overcoordinated first-shell neighbor to form an H-bond with an undercoordinated second- shell neighbor.
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