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Showing papers on "Microbial biodegradation published in 1997"


Journal ArticleDOI
TL;DR: A review of pathways for biodegradation of DDT, DDD, and DDE by bacteria and fungi is described in this article, where Ligninolytic fungi and chlorobiphenyl degrading bacteria are promising candidates for remediation.
Abstract: Microbial degradation of DDT residues is one mechanism for loss of DDT from soil. In this review pathways for biodegradation of DDT, DDD, and DDE by bacteria and fungi are described. Biodegradation of DDT residues can proceed in soil, albeit at a slow rate. To enhance degradation in situ a number of strategies are proposed. They include the addition of DDT‐metabolising microbes to contaminated soils and/or the manipulation of environmental conditions to enhance the activity of these microbes. Ligninolytic fungi and chlorobiphenyl degrading bacteria are promising candidates for remediation. Flooding of soil and the addition of organic matter can enhance DDT degradation. As biodegradation may be inhibited by lack of access of the microbe to the contaminant, the soil may need to be pre‐treated with a surfactant. Unlike DDT, little is known about the biodegradation of DDE, and this knowledge is crucial as DDE can be the predominant residue in some soils.

257 citations


Journal ArticleDOI
TL;DR: In this paper, diesel-oil-contaminated alpine subsoils, differing in soil type and bedrock, were investigated in laboratory experiments at 10 °C after supplementation with an inorganic fertilizer.
Abstract: Bioremediation of two diesel-oil-contaminated alpine subsoils, differing in soil type and bedrock, was investigated in laboratory experiments at 10 °C after supplementation with an inorganic fertilizer. Initial diesel oil contamination of 4000 mg kg−1 soil dry matter (dm) was reduced to 380–400 mg kg−1 dm after 155 days of incubation. In both soils, about 30 % of the diesel oil contamination (1200 mg kg−1 dm) was eliminated by abiotic processes. The residual decontamination (60 %–65 %) could be attributed to microbial degradation activities. In both soils, the addition of a cold-adapted diesel-oil-degrading inoculum enhanced biodegradation rates only slightly and temporarily. From C/N and N/P ratios (determined by measuring the contents of total hydrocarbons, NH4+ N, NO3− N and PO43− P) of soils␣it could be deduced that there was no nutrient deficiency during the whole incubation period. Soil biological activities (basal respiration and dehydrogenase activity) corresponded to the course of biodegradation activities in the soils.

195 citations


Journal Article
01 Jan 1997-Analusis
TL;DR: In this paper, a low-cost process based on microbial activation in the root zone, is a novel method under deep investigation, where the main remediation methods are containment, thermal desorption, incineration, and microbial degradation.
Abstract: Polycyclic aromatic hydrocarbons (PAHs) are potentially mutagenic and carcinogenic substances occurring at various concentrations in atmosphere, soils, waters and sediments. PAHs, inherited both from natural and anthropogenic processes, are persistent organic pollutants (POP) due to their chemical stability and biodegradation resistance. The increase of road transportation, and of industrial and agricultural activities has led to a notable build up of PAH amounts in the environmental media. For cases of heavy soil pollution, the main remediation methods are containment, thermal desorption, incineration, and microbial degradation. Phytoremediation, a low-cost process based on microbial activation in the root zone, is a novel method under deep investigation.

119 citations


Journal ArticleDOI
TL;DR: In this paper, the potential of anaerobic granular sludge for the transformation and mineralization of N-substituted aromatic compounds has been examined, and it was shown that some aromatic amines can be completely mineralized and serve as a carbon and energy source for an aerobic bacteria.
Abstract: N-Substituted aromatic compounds are environmental contaminants associated with the production and use of dyes, explosives, pesticides and pharmaceuticals. In this article, we examine the potential of anaerobic granular sludge from anaerobic treatment systems towards the detoxification, transformation, and mineralization of nitroaromatic and azo compounds. Nitroaromatics and azo dyes with strong electron withdrawing are highly inhibitory to acetoclastic methanogenic bacteria. However, nitro and azo substituted aromatics are readily reductively detoxified in methanogenic consortia to their respective aromatic amines, which are several orders of magnitude less toxic. This reductive detoxification has allowed the successful operation of anaerobic reactors for the treatment of highly toxic aromatic compounds. In the course of the experiments it was discovered that some aromatic amines were mineralized. These results indicate that some N-substituted aromatic compounds can be completely mineralized and serve as a carbon and energy source for anaerobic bacteria.

91 citations



Journal ArticleDOI
TL;DR: In this paper, 13 different bioremediation products were evaluated for their effectiveness in biodegrading petroleum hydrocarbons, including bioaugmentation agents, bio-imulation agents, and biostimulation agent.

61 citations


Journal ArticleDOI
TL;DR: The results from the measurements of aliphatic hydrocarbons suggest that petroleum derived effluents are mainly petroleum derived; those in the Tijuana River runoff have largely originated from terrestrial plants with visible petroleum contamination; and those in sediment traps and sediments at various coastal locations off San Diego have mostly resulted from biogenic contributions with enhanced microbial products in the summer season as discussed by the authors.
Abstract: The results from the measurements of aliphatic hydrocarbons suggest that hydrocarbons in the Point Loma Wastewater Treatment Plant (PLWTP) effluents are mainly petroleum derived; those in the Tijuana River runoff have largely originated from terrestrial plants with visible petroleum contamination; and those in the sea surface microlayer, sediment traps, and sediments at various coastal locations off San Diego have mostly resulted from biogenic contributions with enhanced microbial products in the summer season. Rainfall in the winter season appeared to amplify the inputs from terrestrial higher plants to the coastal areas. The PLWTP discharged approximately 3.85 metric tons of n-alkanes (C10-C35) in 1994, well below the level (136 metric tons) estimated in 1979. The input of aliphatic hydrocarbons from the Tijuana River was about 0.101 metric tons in 1994. Diffusion, solubilization, evaporation, and microbial degradation seemed partially responsible for the difference in the concentrations and compositions of aliphatic hydrocarbons in different sample media, although the relative importance of each mechanism cannot be readily discerned from the available data. The results from analyses of aliphatic hydrocarbon compositional indices are generally consistent with those of polycyclic aromatic hydrocarbons.

42 citations


Journal ArticleDOI
TL;DR: The rapid PCR method and fluorescent antibody techniques were successfully applied for tracing the specified microorganisms, which were inoculated into a mixed culture system and the metabolic pathway was investigated and enzymes were purified.
Abstract: Rhodococcus erytropolis and Pseudomonas sp. rapidly degrade many kinds of polycyclic aromatic hydrocarbon (PAH) compounds such as phenanthrene and phthalate esters such as di(2-ethylhexyl) phthalate, used as plasticizers. These compounds were efficiently removed from wastewater by inoculating viable cells of Rhodococcus erythropolis and Pseudomonas sp. into activated sludge as a biological treatment system. The rapid PCR method and fluorescent antibody techniques were successfully applied for tracing the specified microorganisms, which were inoculated into a mixed culture system. The relationship of microflora to the removal rate of these compounds such as phthalate esters in inoculated biological treatment systems was examined. The metabolic pathway was investigated and enzymes were purified.

39 citations


Journal ArticleDOI
TL;DR: The results suggest that the stimulatory effects of the biosurfactant on the biodegradation of the oily substrate are limited over time by the loss of surface activity of the biodiesel-like substance after 30 days of incubation.
Abstract: The biodegradation of an oily sludge is facilitated by a microbial tensio-active agent isolated from Pseudomonas aeruginosa USB-CS1. The optimal oil-in-water dispersion conditions are as follows: pH 6.5, temperature 30 °C, agitation 150 rev/min. The total hydrocarbon content shows that the biodegradation of the oily substrate mediated by the biosurfactant or by the biosurfactant–P. aeruginosa USB-CS1 complex is significantly higher after 30 days of incubation than that in other experimental conditions, by a mean of 70%. Substrate fractionation by column chromatography reveals that, if biosurfactant is present, saturated and aromatic compounds are more susceptible to microbial degradation than they are in other biodegradation systems by an average of 55% and 40% respectively. These results suggest that the stimulatory effects of the biosurfactant on the biodegradation of the oily substrate are limited over time by the loss of surface activity of the biosurfactant after 30 days of incubation.

30 citations


Book
01 Jan 1997
TL;DR: This work presents a meta-modelling study of the bioremediation of Sites Polluted by Heavy Metals and its effects on Microorganisms Involved in the Biodegradation of Organic Compounds and Populations.
Abstract: 1. Environmental Site Assessments and Bioremediation J.G. Ham, J.S. Bonner. 2. Microbial Ecology of Contaminated Sites C.S. Jacobsen, R.R. Gayazov. 3. Predictive Models for the Efficacy of Bioremediation F. Briganti, et al. 4. Rates and Dynamics of Bioremediation S.D. Varfolomeyev. 5. Microorganisms Involved in the Biodegradation of Organic Compounds L. Golovleva. 6. Microbial Resources for Bioremediation of Sites Polluted by Heavy Metals M. Mergeay. 7. Bioconversion and Removal of Metals and Radionuclides F. Baldi, et al. 8. Adaptation: Dynamics of Genes, Enzyme Activities and Populations F. Baldi, et al. 9. Protein Engineering for Improved Biodegradation of Recalcitrant Pollutants J.R. Mason, et al.

15 citations


Journal ArticleDOI
TL;DR: In a continuous flow bioreactor seeded with microbes from municipal activated sludge, complete organic carbon oxidation of simulated graywater was achieved at dilution rates up to 0.36 h−1 in the presence of 64.1 μ M linear alkylbenzenesulfonate (LAS).
Abstract: In a continuous flow bioreactor seeded with microbes from municipal activated sludge, complete organic carbon oxidation of simulated graywater (wastewater produced in human residences, excluding toilet wastes) was achieved at dilution rates up to 0.36 h−1 in the presence of 64.1 μ M linear alkylbenzenesulfonate (LAS) L−1. At LAS concentrations of 187 μ M, the system functioned only at dilution rates up to 0.23 h−1, and the biomass yield was two-fold lower. There were physiological changes in the microbial communities under different operating conditions, as measured by specific contents of ATP and extracellular hydrolases as well as the respiratory potential of the biomass. LAS inhibited the activity of LAS-degrading microbes at >150 μ M LAS, and the activity of other microbes at >75 μ M LAS. Chemical analysis of graywater indicated that samples consisted primarily of biological polymers (proteins and polysaccharides) and lower concentrations of surfactants. Biological remediation of graywater is possible, although treatment efficiency is influenced by the operating conditions and wastestream composition.

Journal ArticleDOI
TL;DR: Microbial action was found to degrade, biotransform, oxidise, dehydrogenate and dearomatize the chemical components of the latex, and aeruginosa and streptococcus sp were found to be the potential candidates for the microbial degradation of latex.
Abstract: The latex of Calotropia arocera (Ait.) R.Br., (a potential petrocrop) may be exploited to obtain fuels and chemicals. This latex has been subjected to microbial action with Sphaerotilus aeruginosa, Sphaerotilus natans, Streptococcus sp.. Escherichia coli. Penicllllum expanaum and Mucor Sp. with an aim to find out a biochemical route way to obtain fuels and chemicals. The treated latex was extracted with hexane, chloroform and methanol separately. The extracts obtained were analysed using 13CNMR and 1HNMR spectral techniques to understand the chemical dynamics of biotransformation of latex components. Microbial action was found to degrade, biotransform, oxidise, dehydrogenate and dearomatize the chemical components of the latex. S. aeruginosa and streptococcus sp were found to be the potential candidates for the microbial degradation of latex. Latex mainly contains triterterpenoid, steroid etc. compounds. These acyclic and naphthenic type of compounds are stabler and relatively less reactive compo...

01 Jan 1997
TL;DR: The observed degradation of naphthalene in a sediment column could not be obtained in batch cultures, despite the large variety of tested enrichment conditions, and the rate of oxidation was found to be lower with the crystalline than with the amorphous manganese oxide.
Abstract: Aromatic hydrocarbons are widespread in nature, due to increasing industrial activity, and often contribute to polluted soils, sediments, and groundwater. Most of these compounds are toxic at relatively high concentrations, but some are already carcinogenic at very low concentrations, e.g. benzene. A growing awareness of the health risks associated with contamination has directed research to the removal or degradation of such compounds. The use of microorganisms to degrade toxic compounds (bioremediation) is a relatively slow process compared to traditional, chemical methods, but it is a natural process, mostly very specific and low in costs. A review of the available information on the microbial degradation of aromatic compounds is given in chapter 1. The anaerobic degradation is emphasized, since in many polluted environments oxygen is limiting and anaerobic processes will prevail. In the absence of oxygen, compounds like nitrate, metalions (Fe 3+ and Mn 4+ ), sulfate, and carbondioxide, have taken over the function of oxygen as a terminal electron acceptor. In addition, the first transformation reactions differ from those in aerobic processes. Oxygenases are no longer ftinctioning and the degradation of oxygenated aromatic compounds, like benzoate and phenol, is known to occur via e.g. reduction, dehydroxylation and dehydrogenation of the aromatic ring. Information on the anaerobic degradation of mono- and polycyclic aromatic hydrocarbons without functional groups, like toluene, benzene, and naphthalene, is scarse. To gain more insight in the possibilities and limitations of the anaerobic degradation of these aromatic compounds, their behaviour in anaerobic sediment columns was followed. Toluene, benzene, and naphthalene were chosen as model compounds under methanogenic, sulfate-, iron-, manganese-, and nitrate-reducing conditions (Chapter 2). Toluene was transformed readily (within 1 to 2 months), while benzene was recalcitrant over the test period of 375-525 days under all redox conditions tested. Naphthalene was partly transformed in the column with nitrate or manganese as electron acceptor present; the addition of benzoate had a positive effect on the degradation of naphthalene in the column with nitrate. In the column with sulfate, the majority of the added naphthalene disappeared. No effect on the degradation of naphthalene was observed after adding and omitting an easier degradable substrate. [ 14 C]naphthalene was used to confirm the disappearance to be the result of degradation; two third of the naphthalene was converted to CO 2 .Numerous attempts have been made for further enrichment of sulfatereducing, naphthalene degrading bacteria (Chapter 3). Unfortunately, the observed degradation of naphthalene in a sediment column could not be obtained in batch cultures, despite the large variety of tested enrichment conditions (different naphthalene concentrations, inoculum. size, medium composition, extra additions etc.). A toxic effect of naphthalene on sulfate- reducing bacteria could not be found.Toluene degradation in the columns was demonstrated under all redox conditions tested. Chapter 4 describes the degradation of toluene in freshly started sediment columns, to which either amorphous or highly crystalline manganese oxide had been added. In batch experiments with material from these columns as inoculum, the degradation of toluene to C0 2 and the formation of biomass under manganese-reducing conditions was demonstrated. The oxidation of toluene was found to be coupled to the reduction of Mn(IV), and the rate of oxidation was found to be lower with the crystalline than with the amorphous manganese oxide. Upon successive transfers of the enrichment cultures, the toluene degrading activity would decrease in time. The activity could only be maintained in the presence of sterilized Rhine river sediment or its supernatant. Without the sediment, but in the presence of solids like teflon beads, glass beads, bentonite, vermiculite and sterilized granular sludge, the toluene degrading activity completely disappeared after 4 to 5 transfers. Furthermore, a direct contact between the bacteria and the manganese oxide was found to be advantageous for a rapid toluene degradation. The degradation rate could further be increased by adding organic ligands such as oxalic acid or nitrilotriacetic acid (NTA).The highly purified enrichment culture LET-13, which degrades toluene with manganese oxide as electron acceptor, was obtained via repeated dilution series, and is described and characterized in chapter 5. LET-13 was able to degrade a variety of substituted monoaromatic compounds like (p-hydroxy) benzylalcohol, (p-hydroxy) benzaldehyde, (p-hydroxy) benzoate, cresol, and phenol. Benzene, ethylbenzene, xylene and naphthalene were not degraded under the experimental conditions used. The degradation of toluene occurred via hydroxylation of the methyl group to benzoate, and a possible side reaction can lead to the formation of cresol.All organisms in the culture look similar; motile rods which are gram negative, oxidase negative and catalase negative. The culture was partly identified with phylogenetic analysis of cloned rDNA sequences. The phylogenetic analysis showed that at least two major groups of bacteria are present. One group of bacteria belongs to the Bacteroides- Cytophaga group, and one group consists of members of the β-subclass of the Proteobacteria.Finally, the results from this research are discussed in relation to their relevance for soil bioremediation technologies.

Journal ArticleDOI
TL;DR: Aerobic and anaerobic degradation rates of petroleum hydrocarbons, i.e., hexadecane (HEX), phenanthrene (PHE), and anthracene (ANT), were determined in estuarine sediment of the Tama River in urban Tokyo, followed by estimating their respective degradation potential.

Journal ArticleDOI
TL;DR: Soil samples from several depths at a former wood treatment site were placed under varying conditions in the laboratory to determine the anaerobic and aerobic potential for biodegradation of chlorophenols at the site.
Abstract: Pentachlorophenol (PCP) use as a general biocide, particularly for treating wood, has led to widespread environmental contamination. Biodegradation has emerged as the main mechanism for PCP degradation in soil and groundwater and a key strategy for remediation. Examining the microbial biodegrading potential for PCP at a contaminated site is crucial in determining its fate. Hundreds of studies have been published on PCP microbial degradation, but few have described the biodegradation of PCP that has been in contact with soils for many years. The bioavailability of “aged” hydrophobic organics is a significant concern. PCP- and 2,3,4,6-tetrachlorophenol (2,3,4,6-TeCP)-contaminated soil samples from several depths at a former wood treatment site were placed under varying conditions in the laboratory to determine the anaerobic and aerobic potential for biodegradation of chlorophenols at the site. PCP biodegradation occurred in both anaerobic and aerobic soil samples. Rapid aerobic degradation occurred...

Patent
27 May 1997
TL;DR: In this paper, a method for bioremediating PCB-contaminated environments in a commercially practical manner using l-carvone, a nontoxic and inexpensive chemical component of spearmint, to induce Arthrobacter strain B1B to cometabolize and to substantially degrade PCBs.
Abstract: Methods and compositions are disclosed for the microbial degradation of polychlorinated biphenyl compounds (PCBs) at a concentration of 100-200 mg/kg soil in contaminated environments, using natural, non-toxic, environmentally-acceptable compounds for application to such environments, such that PCB-contaminated environments are bioremediated by inducing a metabolic pathway in PCB-degrading microbes. Inoculated or indigenous PCB-degrading microbes, such as Arthrobacter strain B1B are induced to decontaminate the PCBs. Also disclosed are a plant and chemical screening assays for identifying plants that produce metabolites which promote PCB cometabolism. Further disclosed is a method for bioremediating PCB-contaminated environments in a commercially practical manner using l-carvone, a nontoxic and inexpensive chemical component of spearmint, for the in situ cleanup of PCB-contaminated soils, to induce Arthrobacter strain B1B to cometabolize and to substantially degrade PCBs.

Journal ArticleDOI
TL;DR: A feasibility study demonstrating this principle was performed on-site in southern Louisiana to evaluate the effectiveness of two microbial degradation remediation methods used to decrease the human carcinogenic risks associated with exposure to ethylene dichloride and vinyl chloride concentrations in contaminated clay and sludge soils at the site as discussed by the authors.
Abstract: Natural microbes living in contaminated subsurface media can be enhanced to degrade large concentrations of contaminating compounds at a faster rate than the microbes could degrade under natural conditions. A feasibility study demonstrating this principle was performed on-site in southern Louisiana to evaluate the effectiveness of two microbial degradation remediation methods used to decrease the human carcinogenic risks associated with exposure to ethylene dichloride and vinyl chloride concentrations in contaminated clay and sludge soils at the site. The results of the study are compared to an acceptable Louisiana Department of Environmental Quality closure level to evaluate in-situ microbial enhancement in chlorinated aliphatic-contaminated sludge and clay soils as a remediation/cleanup alternative in similar industrial situations.

Journal ArticleDOI
TL;DR: It was found that the degradative activity of the mixture gradually diminished with time, the number of methanobacteria also diminishing and finally disappearing, and in the M9 MOD medium the de gradative activity remained stable.


Journal Article
TL;DR: The soil degradation in dry farming was more rapid than in paddyy field and the micro-organisms degrading PCP were Acetobacter, Alcaligenes and Aeromonas; the photolysis of PCP in solution exposed to U. V ferformsu (λ=320nm) was rapidy.
Abstract: PCP degradation was studied by test of simulation and pot culture and microbial experiments. In the PCP-polluted area total microbial quantity was unchanged and the main microbial populations included Bacillus, Streptomyces and Aspergillus. The soil degradation in dry farming was more rapid than in paddyy field. The micro-organisms degrading PCP were Acetobacter, Alcaligenes and Aeromonas. The photolysis of PCP in solution exposed to U. V ferformsu (λ=320nm) was rapidy.

Journal ArticleDOI
TL;DR: Experimental data and field observations has formed the basis to develop a technique to evaluate in relative units the amount of the substrate consumed by biocenosis of the active sludge in the air tanks of purification facilities.

Book ChapterDOI
01 Jan 1997
TL;DR: This chapter describes the basic processes of the microbiological conversion of xenobiotics along with a characterization of the enzymes that bring about these bioconversions.
Abstract: Many of the microorganisms capable of the degradation and bioconversion of organic compounds are described in this chapter. Basic processes of the microbiological conversion of xenobiotics are considered along with a characterization of the enzymes that bring about these bioconversions. Special attention is paid to the processes of microbiological transformation of xenobiotics which lead to more recalcitrant and toxic intermediates compared to their parent compounds. Several examples of the use of microorganisms in the practical application of bioremediation on sites contaminated with organic pollutants are referenced and briefly described.