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A. Francis Stewart
Researcher at Dresden University of Technology
Publications - 196
Citations - 17815
A. Francis Stewart is an academic researcher from Dresden University of Technology. The author has contributed to research in topics: Gene & Recombineering. The author has an hindex of 69, co-authored 170 publications receiving 16036 citations. Previous affiliations of A. Francis Stewart include Max Planck Society & Biotec.
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Journal ArticleDOI
A conditional knockout resource for the genome-wide study of mouse gene function.
William C. Skarnes,Barry Rosen,Anthony P. West,Manousos Koutsourakis,Wendy Bushell,Vivek Iyer,Alejandro O. Mujica,Alejandro O. Mujica,Mark G. Thomas,Jennifer Harrow,Tony Cox,David A. Jackson,Jessica Severin,Jessica Severin,Patrick J. Biggs,Patrick J. Biggs,Jun Fu,Michael Nefedov,Pieter J. de Jong,A. Francis Stewart,Allan Bradley +20 more
TL;DR: High-throughput genome engineering highlighted by this study is broadly applicable to rat and human stem cells and provides a foundation for future genome-wide efforts aimed at deciphering the function of all genes encoded by the mammalian genome.
Journal ArticleDOI
The Transcriptional and Epigenomic Foundations of Ground State Pluripotency
Hendrik Marks,T. Kalkan,Roberta Menafra,Sergey Denissov,Kenneth D Jones,Helmut Hofemeister,Jennifer Nichols,Jennifer Nichols,Andrea Kranz,A. Francis Stewart,Austin Smith,Austin Smith,Hendrik G. Stunnenberg +12 more
TL;DR: It is suggested that transcriptional potentiation and a permissive chromatin context characterize the ground state and that exit from it may not require a metastable intermediate or multilineage priming.
Journal ArticleDOI
High-throughput engineering of the mouse genome coupled with high-resolution expression analysis
David M. Valenzuela,Andrew J. Murphy,David Frendewey,Nicholas W. Gale,Aris N. Economides,Wojtek Auerbach,William Poueymirou,Niels C. Adams,Rojas Jose F,Jason Yasenchak,Rostislav Chernomorsky,Marylene Boucher,Andrea L Elsasser,Lakeisha Esau,Jenny Zheng,Jennifer A. Griffiths,Xiaorong Wang,Hong Su,Yingzi Xue,Melissa G. Dominguez,Irene Noguera,Richard Torres,Macdonald Lynn,A. Francis Stewart,Thomas M. DeChiara,George D. Yancopoulos +25 more
TL;DR: The development of a high-throughput and largely automated process that uses targeting vectors based on bacterial artificial chromosomes (BACs) that permits genetic alteration with nucleotide precision, is not limited by the size of desired deletions, does not depend on isogenicity or on positive–negative selection, and can precisely replace the gene of interest with a reporter that allows for high-resolution localization of target-gene expression.
Journal ArticleDOI
BAC TransgeneOmics: a high-throughput method for exploration of protein function in mammals.
Ina Poser,Mihail Sarov,Mihail Sarov,James R. A. Hutchins,Jean-Karim Hériché,Yusuke Toyoda,Andrei Pozniakovsky,Daniela Weigl,Anja Nitzsche,Björn Hegemann,Alexander W. Bird,Laurence Pelletier,Laurence Pelletier,Ralf Kittler,Ralf Kittler,Sujun Hua,Ronald Naumann,Martina Augsburg,Martina M. Sykora,Helmut Hofemeister,Youming Zhang,Kim Nasmyth,Kevin P. White,Steffen Dietzel,Karl Mechtler,Richard Durbin,A. Francis Stewart,Jan-Michael Peters,Frank Buchholz,Anthony A. Hyman +29 more
TL;DR: A fast and reliable pipeline to study protein function in mammalian cells based on protein tagging in bacterial artificial chromosomes (BACs) is described and it is shown that BAC transgenes can be rapidly and reliably generated using 96-well-format recombineering.
Journal ArticleDOI
Rapid modification of bacterial artificial chromosomes by ET-recombination.
TL;DR: The method is based on homologous recombination by ET-cloning and was found to work with high efficiency and should be applicable to any BAC modification desired.