A
Azra Krek
Researcher at Icahn School of Medicine at Mount Sinai
Publications - 25
Citations - 9446
Azra Krek is an academic researcher from Icahn School of Medicine at Mount Sinai. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 15, co-authored 19 publications receiving 8063 citations. Previous affiliations of Azra Krek include Memorial Sloan Kettering Cancer Center & New York University.
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Journal ArticleDOI
Combinatorial microRNA target predictions.
Azra Krek,Dominic Grün,Matthew N. Poy,Rachel Wolf,Lauren Rosenberg,Eric J Epstein,Philip MacMenamin,Isabelle da Piedade,Kristin C. Gunsalus,Markus Stoffel,Nikolaus Rajewsky +10 more
TL;DR: PicTar, a computational method for identifying common targets of micro RNAs, is presented and widespread coordinate control executed by microRNAs is suggested, thus providing evidence for coordinate microRNA control in mammals.
Journal ArticleDOI
A Human snoRNA with MicroRNA-Like Functions
Christine Ender,Azra Krek,Azra Krek,Marc R. Friedländer,Michaela Beitzinger,Lasse Weinmann,Wei Chen,Sébastien Pfeffer,Nikolaus Rajewsky,Gunter Meister +9 more
TL;DR: A class of small RNAs in human cells that originate from snoRNAs and can function like miRNAs is identified, suggesting a role for ACA45-processing products in posttranscriptional gene silencing.
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Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data
Franck Rapaport,Raya Khanin,Yupu Liang,Mono Pirun,Azra Krek,Paul Zumbo,Christopher E. Mason,Nicholas D. Socci,Doron Betel +8 more
TL;DR: A large number of computational methods have been developed for analyzing differential gene expression in RNA-seq data as discussed by the authors, and a comprehensive evaluation of common methods using the SEQC benchmark dataset and ENCODE data.
Journal ArticleDOI
Cell-type-specific signatures of microRNAs on target mRNA expression
TL;DR: The hypothesis that miRNA expression broadly contributes to tissue specificity of mRNA expression in many human tissues is supported.
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Dicer Ablation Affects Antibody Diversity and Cell Survival in the B Lymphocyte Lineage
Sergei B. Koralov,Stefan A. Muljo,Gunther R. Galler,Azra Krek,Azra Krek,Tirtha Chakraborty,Chryssa Kanellopoulou,Kari Jensen,Bradley S. Cobb,Matthias Merkenschlager,Nikolaus Rajewsky,Klaus Rajewsky +11 more
TL;DR: Investigating the role of Dicer-dependent control mechanisms in B lymphocyte development found intact Ig gene rearrangements in immunoglobulin heavy (IgH) and kappa chain loci, but increased sterile transcription and usage of D(H) elements of the DSP family in IgH, and increased N sequence addition in Igkappa due to deregulated transcription of the terminal deoxynucleotidyl transferase gene.