D
Daniel S. Kosack
Researcher at J. Craig Venter Institute
Publications - 4
Citations - 2290
Daniel S. Kosack is an academic researcher from J. Craig Venter Institute. The author has contributed to research in topics: Genome & Pseudomonas putida. The author has an hindex of 4, co-authored 4 publications receiving 2198 citations.
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Journal ArticleDOI
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
Karen E. Nelson,Christian Weinel,Ian T. Paulsen,Robert J. Dodson,H. Hilbert,V. A. P. Martins Dos Santos,Derrick E. Fouts,Steven R. Gill,Mihai Pop,Mark A. Holmes,Lauren M. Brinkac,Maureen J. Beanan,Robert T. DeBoy,Sean C. Daugherty,James F. Kolonay,Ramana Madupu,William C. Nelson,Owen White,Jeremy Peterson,Hoda Khouri,Ioana R. Hance,P. Chris Lee,Erik Holtzapple,David J. Scanlan,Kevin Tran,A. Moazzez,T. Utterback,M. Rizzo,K. Lee,Daniel S. Kosack,D. Moestl,H. Wedler,J. Lauber,Diana Stjepandic,Jörg D. Hoheisel,M. Straetz,Sabina Heim,C. Kiewitz,Jonathan A. Eisen,Kenneth N. Timmis,A. Düsterhöft,Burkhard Tümmler,Claire M. Fraser +42 more
TL;DR: Pseudomonas putida is a metabolically versatile saprophytic soil bacterium that has been certified as a biosafety host for the cloning of foreign genes.
Journal ArticleDOI
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
Jane M. Carlton,Samuel V. Angiuoli,Bernard B. Suh,Taco W. A. Kooij,Mihaela Pertea,Joana C. Silva,Maria D. Ermolaeva,Jonathan E. Allen,Jeremy D. Selengut,Hean L. Koo,Jeremy Peterson,Mihai Pop,Daniel S. Kosack,Martin Shumway,Shelby L. Bidwell,Shamira J. Shallom,Susan Van Aken,Steven B. Riedmuller,Tamara Feldblyum,Jennifer Cho,John Quackenbush,Martha Sedegah,Azadeh Shoaibi,Leda M. Cummings,Laurence Florens,John R. Yates,J. Dale Raine,Robert E. Sinden,Michael Harris,Deirdre A. Cunningham,Peter R. Preiser,Lawrence W. Bergman,Akhil B. Vaidya,Leo H.M. van Lin,Chris J. Janse,Andrew P. Waters,Hamilton O. Smith,Owen White,Steven L. Salzberg,J. Craig Venter,Claire M. Fraser,Stephen L. Hoffman,Malcolm J. Gardner,Daniel J. Carucci +43 more
TL;DR: This is the first genome sequence of a model eukaryotic parasite, and it provides insight into the use of such systems in the modelling of Plasmodium biology and disease.
Journal ArticleDOI
Hierarchical Scaffolding With Bambus
TL;DR: This work has developed a general-purpose scaffolder, called Bambus, which affords users significant flexibility in controlling the scaffolding parameters and enables the use of linking data other than that inferred from mate-pair information.
Journal ArticleDOI
Erratum: Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 (Environmental Microbiology 4:12 (799-808))
Karen E. Nelson,Christian Weinel,Ian T. Paulsen,Robert J. Dodson,H. Hilbert,V. A. P. Martins Dos Santos,Derrick E. Fouts,Steven R. Gill,Mihai Pop,Mark A. Holmes,Lauren M. Brinkac,Maureen J. Beanan,Robert T. DeBoy,Sean C. Daugherty,James F. Kolonay,Ramana Madupu,William C. Nelson,Owen White,Jeremy Peterson,Hoda Khouri,Ioana R. Hance,P. Chris Lee,Erik Holtzapple,David J. Scanlan,Kevin Tran,A. Moazzez,T. Utterback,M. Rizzo,K. Lee,Daniel S. Kosack,D. Moestl,H. Wedler,J. Lauber,Diana Stjepandic,Jörg D. Hoheisel,M. Straetz,Sabina Heim,C. Kiewitz,Jonathan A. Eisen,Kenneth N. Timmis,A. Düsterhöft,Burkhard Tümmler,Claire M. Fraser +42 more