D
Dawood B. Dudekula
Researcher at National Institutes of Health
Publications - 33
Citations - 4411
Dawood B. Dudekula is an academic researcher from National Institutes of Health. The author has contributed to research in topics: Gene & Cellular differentiation. The author has an hindex of 23, co-authored 30 publications receiving 3684 citations.
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Journal ArticleDOI
CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs
Dawood B. Dudekula,Amaresh C. Panda,Ioannis Grammatikakis,Supriyo De,Kotb Abdelmohsen,Myriam Gorospe +5 more
TL;DR: A new web tool, CircInteractome (circRNA interactome), is presented, freely accessible at http://circinteractome.nia.nih.gov, for mapping RBP- and miRNA-binding sites on human circRNAs.
Journal ArticleDOI
The status, quality, and expansion of the NIH full-length cDNA project: The Mammalian Gene Collection (MGC)
Daniela S. Gerhard,Lukas Wagner,Elise A. Feingold,Carolyn M. Shenmen,Lynette H. Grouse,Greg Schuler,Steven L. Klein,Susan Old,Rebekah S. Rasooly,Peter J. Good,Mark S. Guyer,Allison M. Peck,Jeffery G. Derge,David J. Lipman,Francis S. Collins,Wonhee Jang,Steven Sherry,Mike Feolo,Leonie Misquitta,Eduardo Lee,Kirill Rotmistrovsky,Susan F. Greenhut,Carl F. Schaefer,Kenneth H. Buetow,Tom I. Bonner,David Haussler,Jim Kent,Mark Diekhans,Terry Furey,Michael R. Brent,Christa Prange,Kirsten Schreiber,Nicole Shapiro,Narayan K. Bhat,Ralph F. Hopkins,Florence Hsie,Tom Driscoll,M. Bento Soares,Maria de Fatima Bonaldo,Thomas L. Casavant,Todd E. Scheetz,Michael J. Brownstein,Ted B. Usdin,Shiraki Toshiyuki,Piero Carninci,Yulan Piao,Dawood B. Dudekula,Minoru S.H. Ko,Koichi Kawakami,Yutaka Suzuki,Sumio Sugano,C. E. Gruber,M. R. Smith,Blake A. Simmons,Troy Moore,Richard C. Waterman,Stephen L. Johnson,Yijun Ruan,Chia-Lin Wei,Sinnakaruppan Mathavan,Preethi H. Gunaratne,Jia Qian Wu,Angela M. Garcia,Stephen W. Hulyk,Edwin Fuh,Ye Yuan,Anna Sneed,Carla Kowis,Anne Hodgson,Donna M. Muzny,John Douglas Mcpherson,Richard A. Gibbs,Jessica Fahey,Jessica Fahey,Erin Helton,Mark Ketteman,Anuradha Madan,Anuradha Madan,Stephanie Rodrigues,Stephanie Rodrigues,Amy Sanchez,Michelle Whiting,Anup Madan,Anup Madan,Alice C. Young,Keith Wetherby,Steven J. Granite,Peggy N. Kwong,Charles P. Brinkley,Russell L. Pearson,Gerard G. Bouffard,Robert W. Blakesly,Eric D. Green,Mark Dickson,Alex Rodriguez,Jane Grimwood,Jeremy Schmutz,Richard M. Myers,Yaron S.N. Butterfield,Malachi Griffith,Obi L. Griffith,Martin Krzywinski,Nancy Y. Liao,Ryan Morrin,Diana L. Palmquist,Anca Petrescu,Ursula Skalska,Duane E. Smailus,Jeff M. Stott,Angelique Schnerch,Jacqueline E. Schein,Steven J.M. Jones,Robert A. Holt,Agnes Baross,Marco A. Marra,Sandra W. Clifton,Kathryn A. Makowski,Stephanie Bosak,Joel A. Malek +118 more
TL;DR: Comparison of the sequence of the MGC clones to reference genome sequences reveals that most cDNA clones are of very high sequence quality, although it is likely that some cDNAs may carry missense variants as a consequence of experimental artifact, such as PCR, cloning, or reverse transcriptase errors.
Journal ArticleDOI
Identification of HuR target circular RNAs uncovers suppression of PABPN1 translation by CircPABPN1.
Kotb Abdelmohsen,Amaresh C. Panda,Rachel Munk,Ioannis Grammatikakis,Dawood B. Dudekula,Supriyo De,Jiyoung Kim,Ji Heon Noh,Kyoung Mi Kim,Jennifer L. Martindale,Myriam Gorospe +10 more
TL;DR: It is proposed that the extensive binding of CircPABPN1 to HuR prevents HuR binding to P ABPN1 mRNA and lowers PABPN1 translation, providing the first example of competition between a circRNA and its cognate mRNA for an RBP that affects translation.
Journal ArticleDOI
Age-associated alteration of gene expression patterns in mouse oocytes
Toshio Hamatani,Geppino Falco,Mark G. Carter,Hidenori Akutsu,Carole A. Stagg,Alexei A. Sharov,Dawood B. Dudekula,Vincent VanBuren,Minoru S.H. Ko +8 more
TL;DR: A group of new oocyte-specific genes, members of the human NACHT, leucine-rich repeat and PYD-containing (NALP) gene family are identified and characterized, suggesting the existence of additional mechanisms for aging.
Journal ArticleDOI
A web-based tool for principal component and significance analysis of microarray data
TL;DR: A program for microarray data analysis, which features the false discovery rate for testing statistical significance and the principal component analysis using the singular value decomposition method for detecting the global trends of gene-expression patterns.