E
Eurie L. Hong
Researcher at Stanford University
Publications - 44
Citations - 12355
Eurie L. Hong is an academic researcher from Stanford University. The author has contributed to research in topics: ENCODE & Genome. The author has an hindex of 24, co-authored 40 publications receiving 10616 citations. Previous affiliations of Eurie L. Hong include University of Cambridge & Princeton University.
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Journal ArticleDOI
Saccharomyces genome database: Underlying principles and organisation
Selina S. Dwight,Rama Balakrishnan,Karen R. Christie,Maria C. Costanzo,Kara Dolinski,Stacia R. Engel,Becket Feierbach,Dianna G. Fisk,Jodi E. Hirschman,Eurie L. Hong,Laurie Issel-Tarver,Robert S. Nash,Anand Sethuraman,Barry Starr,Chandra L. Theesfeld,Rey Andrada,Gail Binkley,Qing Dong,Christopher Lane,Mark Schroeder,Shuai Weng,David Botstein,J. Michael Cherry +22 more
TL;DR: Since its inception ten years ago, the Saccharomyces Genome Database has seen a dramatic increase in its usage, has developed and maintained a positive working relationship with the yeast research community, and has served as a template for at least one other database.
Journal ArticleDOI
Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome
Jodi E. Hirschman,Rama Balakrishnan,Karen R. Christie,Maria C. Costanzo,Selina S. Dwight,Stacia R. Engel,Dianna G. Fisk,Eurie L. Hong,Michael S. Livstone,Robert S. Nash,Julie Park,Rose Oughtred,Marek S. Skrzypek,Barry Starr,Chandra L. Theesfeld,Jennifer M. Williams,Rey Andrada,Gail Binkley,Qing Dong,Christopher Lane,Stuart R. Miyasato,Anand Sethuraman,Mark Schroeder,Mayank K. Thanawala,Shuai Weng,Kara Dolinski,David Botstein,J. Michael Cherry +27 more
TL;DR: The Genome Snapshot summarizes the current state of knowledge about the genes and chromosomal features of S.cerevisiae and number and distribution of genes annotated to Gene Ontology terms.
Journal ArticleDOI
Expanded protein information at SGD: new pages and proteome browser.
Robert S. Nash,Shuai Weng,Benjamin C. Hitz,Rama Balakrishnan,Karen R. Christie,Maria C. Costanzo,Selina S. Dwight,Stacia R. Engel,Dianna G. Fisk,Jodi E. Hirschman,Eurie L. Hong,Michael S. Livstone,Rose Oughtred,Julie Park,Marek S. Skrzypek,Chandra L. Theesfeld,Gail Binkley,Qing Dong,Christopher Lane,Stuart R. Miyasato,Anand Sethuraman,Mark Schroeder,Kara Dolinski,David Botstein,J. Michael Cherry +24 more
TL;DR: Improvements to the layout of the Protein Information page and integration of the Proteome Browser will facilitate the ongoing expansion of sequence-specific experimental information captured in SGD, including post-translational modifications and other user-defined annotations.
Journal ArticleDOI
Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins
Shuai Weng,Qing Dong,Rama Balakrishnan,Karen R. Christie,Maria C. Costanzo,Kara Dolinski,Selina S. Dwight,Stacia R. Engel,Dianna G. Fisk,Eurie L. Hong,Laurie Issel-Tarver,Anand Sethuraman,Chandra L. Theesfeld,Rey Andrada,Gail Binkley,Christopher Lane,Mark Schroeder,David Botstein,J. Michael Cherry +18 more
TL;DR: The Saccharomyces Genome Database (SGD) has recently developed new resources to provide more complete information about proteins from the budding yeast SacCharomyces cerevisiae, including the Protein Information page, which contains protein physical and chemical properties, predicted from the translated ORF sequence.
Journal ArticleDOI
Genome-wide analysis provides genetic evidence that ACE2 influences COVID-19 risk and yields risk scores associated with severe disease
Julie Horowitz,Jack A. Kosmicki,Amy Damask,Deepika Sharma,Genevieve H.L. Roberts,Anne E. Justice,Nilanjana Banerjee,Marie V. Coignet,Ashish Yadav,Joseph B. Leader,Anthony Marcketta,Danny S. Park,Evan Maxwell,Spencer C. Knight,Xiaodong Bai,Harendra Guturu,Dylan Sun,Asher Baltzell,Fabrício S. P. Kury,Joshua D. Backman,Ahna R. Girshick,Colm O'Dushlaine,Shannon McCurdy,Raghavendran Partha,Adam Mansfield,David A. Turissini,Miao Zhang,Joelle Mbatchou,Kyoko Watanabe,Lauren Gurski,Shane McCarthy,L. Dobbyn,Elisabeth Stahl,Anurag Verma,Giorgio Sirugo,Giovanni Coppola,Andrew Deubler,Aris Bass Economides,Katia Karalis,Luca A. Lotta,Alan R. Shuldiner,Christina Beechert,Caitlin Forsythe,Erin D. Fuller,Zhenhua Gu,Michael Lattari,Alexander Lopez,Maria Sotiropoulos Padilla,Manasi Pradhan,Kia Manoochehri,Thomas D. Schleicher,Louis Widom,Sarah E. Wolf,Ricardo H. Ulloa,Amelia Dadong Sameer Jeffrey Averitt Li Malhotra Staples,Amelia J Averitt,Dadong Li,Sameer Malhotra,Suying Bao,Boris Boutkov,Siying Chen,Gi Seon Eom,Alicia Hawes,Shareef Khalid,Olga A. Krasheninina,George Mitra,Mona Nafde,Sean O’Keeffe,Max Orelus,Razvan Panea,Tommy Polanco,Ayesha Ghulam Rasool,Jeffrey Staples,Kathie Sun,Jiwen Xin,Manuel A. R. Ferreira,Arkopravo Ghosh,Christopher Gillies,Eric Jorgenson,Hyun Min Kang,Michael Kessler,Alexander H. Li,Nan Lin,Daren Liu,Adam E. Locke,Arden Moscati,Charles Paulding,Carlo Sidore,Bin Ye,B. Zhang,Andrey Ziyatdinov,Ariane Ayer,Aysegul Guvenek,George Hindy,Jan Freudenberg,Jonas Bovijn,Kavita Praveen,Manav Kapoor,M. Haas,Moeen Riaz,Niek Verweij,Olukayode A. Sosina,Parsa Akbari,Priyanka Nakka,Sahar Gelfman,Sujit Gokhale,Tanima De,Veera M. Rajagopal,Gannie Tzoneva,Juan L. Rodriguez-Flores,Shek Man Chim,Valerio Donato,Daniel Fernandez,G. Della Gatta,Alessandro Di Gioia,Kristen Michelle Howell,Lori Khrimian,Minhee Kim,Hector Martinez,Lawrence Miloscio,Sheilyn Nunez,Elias Pavlopoulos,Trikaldarshi Persaud,Esteban Marcus B. Michelle G. Jason Lyndon J. Nirupama Nad Chen Jones LeBlanc Mighty Mitnaul Nishtala Rana,Esteban Chen,Michelle G. LeBlanc,Jason Mighty,Lyndon J. Mitnaul,N. Sudhir Nishtala,N. Rana,Marylyn D. Ritchie,Marcus B. Jones,Suganthi Balasubramanian,Katherine A. Siminovitch,William J Salerno,Daniel J. Rader,Tooraj Mirshahi,Jonathan Marchini,John D. Overton,David J. Carey,Lukas Habegger,Michael Cantor,Kristin A. Rand,Eurie L. Hong,Jeffrey G. Reid,Catherine A. Ball,Aris Baras,Gonçalo R. Abecasis +147 more
TL;DR: In this article , the authors identify a variant (rs190509934, minor allele frequency 0.2-2%) that downregulates ACE2 expression by 37% and reduces the risk of SARS-CoV-2 infection by 40% (odds ratio = 0.60, P = 4.5 × 10 − 13 ).