J
Julianus Pfeuffer
Researcher at University of Tübingen
Publications - 10
Citations - 6542
Julianus Pfeuffer is an academic researcher from University of Tübingen. The author has contributed to research in topics: Toeplitz matrix & Workflow. The author has an hindex of 6, co-authored 8 publications receiving 4389 citations.
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Journal ArticleDOI
The PRIDE database and related tools and resources in 2019: improving support for quantification data.
Yasset Perez-Riverol,Attila Csordas,Jingwen Bai,Manuel Bernal-Llinares,Suresh Hewapathirana,Deepti J. Kundu,Avinash Inuganti,Johannes Griss,Johannes Griss,Gerhard Mayer,Martin Eisenacher,Enrique Perez,Julian Uszkoreit,Julianus Pfeuffer,Timo Sachsenberg,Şule Yılmaz,Shivani Tiwary,Juergen Cox,Enrique Audain,Mathias Walzer,Andrew F. Jarnuczak,Tobias Ternent,Alvis Brazma,Juan Antonio Vizcaíno +23 more
TL;DR: Key statistics on the current data contents and volume of downloads are outlined, and how PRIDE data are starting to be disseminated to added-value resources including Ensembl, UniProt and Expression Atlas are outlined.
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OpenMS: a flexible open-source software platform for mass spectrometry data analysis
Hannes L. Röst,Hannes L. Röst,Timo Sachsenberg,Stephan Aiche,Chris Bielow,Hendrik Weisser,Fabian Aicheler,Sandro Andreotti,Hans-Christian Ehrlich,Petra Gutenbrunner,Erhan Kenar,Xiao Liang,Sven Nahnsen,Lars Nilse,Julianus Pfeuffer,George Rosenberger,Marc Rurik,Uwe Schmitt,Johannes Veit,Mathias Walzer,David Wojnar,Witold Wolski,Oliver Schilling,Jyoti S. Choudhary,Lars Malmström,Lars Malmström,Ruedi Aebersold,Ruedi Aebersold,Knut Reinert,Knut Reinert,Oliver Kohlbacher +30 more
TL;DR: OpenMS 2.0 is presented, a robust, open-source, cross-platform software specifically designed for the flexible and reproducible analysis of high-throughput MS data.
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BioContainers: an open-source and community-driven framework for software standardization.
Felipe da Veiga Leprevost,Björn Grüning,Saulo Alves Aflitos,Hannes L. Röst,Julian Uszkoreit,Harald Barsnes,Marc Vaudel,Marc Vaudel,Pablo Moreno,Laurent Gatto,Jonas Weber,Mingze Bai,Rafael C. Jimenez,Timo Sachsenberg,Julianus Pfeuffer,Roberto Vera Alvarez,Johannes Griss,Johannes Griss,Alexey I. Nesvizhskii,Yasset Perez-Riverol +19 more
TL;DR: This paper presents BioContainers, an open-source and community-driven framework which provides platform independent executable environments for bioinformatics software, and provides infrastructure and basic guidelines to create, manage and distribute bioInformatics containers with a special focus on omics technologies.
Journal ArticleDOI
KNIME for reproducible cross-domain analysis of life science data
Alexander Fillbrunn,Christian Dietz,Julianus Pfeuffer,René Rahn,Gregory A. Landrum,Michael R. Berthold +5 more
TL;DR: This review paper presents selected extensions from the life sciences that simplify data exploration, analysis, and visualization and are interoperable due to KNIME's unified data model.
Journal Article
A bounded p-norm approximation of max-convolution for sub-quadratic Bayesian Inference on additive factors
Julianus Pfeuffer,Oliver Serang +1 more
TL;DR: In this article, the p-norm is used as a direct approximation of the Chebyshev norm, which can be computed in O(k log(k) log(log(k)) time.