P
Pablo Conesa
Researcher at Spanish National Research Council
Publications - 44
Citations - 1731
Pablo Conesa is an academic researcher from Spanish National Research Council. The author has contributed to research in topics: Computer science & Image processing. The author has an hindex of 15, co-authored 37 publications receiving 1338 citations. Previous affiliations of Pablo Conesa include European Bioinformatics Institute.
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Journal ArticleDOI
MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data
Kenneth Haug,Reza M. Salek,Pablo Conesa,Janna Hastings,Paula de Matos,Mark L Rijnbeek,Tejasvi Mahendraker,Mark Williams,Steffen Neumann,Philippe Rocca-Serra,Eamonn Maguire,Alejandra Gonzalez-Beltran,Susanna-Assunta Sansone,Julian L. Griffin,Christoph Steinbeck +14 more
TL;DR: The MetaboLights repository, powered by the open source ISA framework, is cross-species and cross-technique and will cover metabolite structures and their reference spectra as well as their biological roles, locations, concentrations and raw data from metabolic experiments.
Journal ArticleDOI
MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps
José Luis Vilas,Josué Gómez-Blanco,Pablo Conesa,Roberto Melero,José Miguel de la Rosa-Trevín,Joaquín Otón,J. Cuenca,Roberto Marabini,José María Carazo,Javier Vargas,Carlos Oscar S. Sorzano,Carlos Oscar S. Sorzano +11 more
TL;DR: A fully automatic, accurate method for determining the local resolution of a 3D map (MonoRes), which is computationally more rapid than existing methods in the field and offers the option of local filtering of the original map based on the calculated local resolution.
Journal ArticleDOI
MetaboLights: An Open-Access Database Repository for Metabolomics Data.
Namrata Kale,Kenneth Haug,Pablo Conesa,Kalaivani Jayseelan,Pablo Moreno,Philippe Rocca-Serra,Venkata Chandrasekhar Nainala,Rachel Spicer,Mark Williams,Xuefei Li,Reza M. Salek,Julian L. Griffin,Christoph Steinbeck +12 more
TL;DR: This unit provides a guide to using MetaboLights, downloading experimental data, and depositing metabolomics datasets using user‐friendly submission tools.
Journal ArticleDOI
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
Reza M. Salek,Reza M. Salek,Steffen Neumann,Daniel Schober,Jan Hummel,Kenny Billiau,Joachim Kopka,Elon Correa,Theo H. Reijmers,Antonio Rosato,Leonardo Tenori,Paola Turano,Silvia Marin,Catherine Deborde,Daniel J. Jacob,Dominique Rolin,Benjamin Dartigues,Pablo Conesa,Kenneth Haug,Philippe Rocca-Serra,Steve O'Hagan,Jie Hao,Michael van Vliet,Marko Sysi-Aho,Christian Ludwig,Jildau Bouwman,Marta Cascante,Timothy M. D. Ebbels,Julian L. Griffin,Julian L. Griffin,Annick Moing,Macha Nikolski,Matej Orešič,Susanna-Assunta Sansone,Mark R. Viant,Royston Goodacre,Ulrich L. Günther,Thomas Hankemeier,Claudio Luchinat,Dirk Walther,Christoph Steinbeck +40 more
TL;DR: The Framework Programme 7 EU Initiative Coordination of Standards in metabolomics (COSMOS) is developing a robust data infrastructure and exchange standards for metabolomics data and metadata as discussed by the authors, which can support workflows for a broad range of metabolomics applications within the European metabolomics community and the wider metabolomics and biomedical communities' participation.
Journal ArticleDOI
Automatic local resolution-based sharpening of cryo-EM maps.
Erney Ramírez-Aportela,José Luis Vilas,Alisa Glukhova,Roberto Melero,Pablo Conesa,Marta Martínez,David Maluenda,Javier Mota,A. Jimenez,Javier Vargas,Roberto Marabini,Patrick M. Sexton,José María Carazo,C.O.S. Sorzano +13 more
TL;DR: This work proposes a new method for local sharpening of cryo-EM density maps, based on a local resolution-guided Wiener restoration approach of the original map, and represents the first application of local resolution in crye-EM sharpening.