P
Pau Badia-i-Mompel
Publications - 8
Citations - 129
Pau Badia-i-Mompel is an academic researcher. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 3, co-authored 4 publications receiving 17 citations.
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Journal ArticleDOI
Molecular consequences of SARS-CoV-2 liver tropism
Nicola Wanner,Geoffroy Andrieux,Pau Badia-i-Mompel,Carolin Edler,Susanne Pfefferle,Maja T. Lindenmeyer,Christian Schmidt-Lauber,Jan Czogalla,Milagros N. Wong,Yusuke Okabayashi,Fabian Braun,Marc Lütgehetmann,Elisabeth Meister,Shun Lu,Maria de las Mercedes Noriega,Thomas Günther,Adam Grundhoff,Nicole Fischer,Hanna Bräuninger,Diana Lindner,Dirk Westermann,Fabian Haas,Kevin Roedl,Stefan Kluge,Marylyn M. Addo,Samuel Huber,Ansgar W. Lohse,Jochen Reiser,Benjamin Ondruschka,Jan-Peter Sperhake,Julio Saez-Rodriguez,Melanie Boerries,Salim S. Hayek,Martin Aepfelbacher,Pietro Scaturro,Victor G. Puelles,Tobias B. Huber +36 more
TL;DR: In this article , the authors provide clinical, histopathological, molecular and bioinformatic evidence for the hepatic tropism of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) showing tropism towards several organs, including the heart and kidney.
Journal ArticleDOI
Bioactivity descriptors for uncharacterized chemical compounds.
Martino Bertoni,Miquel Duran-Frigola,Pau Badia-i-Mompel,Eduardo Pauls,Modesto Orozco-Ruiz,Oriol Guitart-Pla,Víctor Alcalde,Víctor M. Díaz,Víctor M. Díaz,Antoni Berenguer-Llergo,Isabelle Brun-Heath,Núria Villegas,Antonio García de Herreros,Patrick Aloy +13 more
TL;DR: In this paper, a collection of deep neural networks are used to infer bioactivity signatures for any compound of interest, even when little or no experimental information is available for them, which can be used as drop-in replacements for chemical descriptors in day-to-day chemoinformatics tasks.
Posted ContentDOI
A Community Challenge for Pancancer Drug Mechanism of Action Inference from Perturbational Profile Data
Douglass Ef,Robert J. Allaway,Bence Szalai,Wenyu Wang,Tingzhong Tian,Adrià Fernández-Torras,Ronald Realubit,Charles Karan,Shuyu Zheng,Alberto Pessia,Ziaurrehman Tanoli,Mohieddin Jafari,Fangping Wan,Shuya Li,Yuanpeng Xiong,Miquel Duran-Frigola,Martino Bertoni,Pau Badia-i-Mompel,Lidia Mateo,Oriol Guitart-Pla,Chung,Jing Tang,Jianyang Zeng,Patrick Aloy,Julio Saez-Rodriguez,Justin Guinney,Daniela S. Gerhard,Andrea Califano +27 more
TL;DR: PANACEA (PANcancer Analysis of Chemical Entity Activity) as mentioned in this paper is a collection of dose-response curves and perturbational profiles for 400 clinical oncology drugs in cell lines selected to optimally represent 19 cancer subtypes.
Posted ContentDOI
Bioactivity descriptors for uncharacterized compounds
Martino Bertoni,Miquel Duran-Frigola,Pau Badia-i-Mompel,Eduardo Pauls,Modesto Orozco-Ruiz,Oriol Guitart-Pla,Víctor Alcalde,Víctor M. Díaz,Antoni Berenguer-Llergo,Antonio García de Herreros,Patrick Aloy +10 more
TL;DR: This work implements a battery of signature-activity relationship (SigAR) models and shows a substantial improvement in performance, with respect to chemistry-based classifiers, across a series of biophysics and physiology activity prediction benchmarks.
Journal ArticleDOI
Bioactivity Profile Similarities to Expand the Repertoire of COVID-19 Drugs.
Miquel Duran-Frigola,Martino Bertoni,Roi Blanco,Víctor Martínez,Eduardo Pauls,Víctor Alcalde,Gemma Turon,Núria Villegas,Adrià Fernández-Torras,Carles Pons,Lidia Mateo,Oriol Guitart-Pla,Pau Badia-i-Mompel,Aleix Gimeno,Nicolas Soler,Isabelle Brun-Heath,Hugo Zaragoza,Patrick Aloy +17 more
TL;DR: An online resource, based on small-molecule bioactivity signatures and natural language processing, to expand the portfolio of compounds with potential to treat COVID-19 by comparing the set of drugs reported to be potentially active against SARS-CoV-2 to a universe of 1 million bioactive molecules.