R
Ramiro Logares
Researcher at Spanish National Research Council
Publications - 137
Citations - 8661
Ramiro Logares is an academic researcher from Spanish National Research Council. The author has contributed to research in topics: Biology & Dinoflagellate. The author has an hindex of 36, co-authored 122 publications receiving 6353 citations. Previous affiliations of Ramiro Logares include University of Hawaii & ICM Partners.
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Journal ArticleDOI
Eukaryotic plankton diversity in the sunlit ocean
Colomban de Vargas,Colomban de Vargas,Stéphane Audic,Stéphane Audic,Nicolas Henry,Nicolas Henry,Johan Decelle,Johan Decelle,Frédéric Mahé,Frédéric Mahé,Frédéric Mahé,Ramiro Logares,Enrique Lara,Cédric Berney,Cédric Berney,Noan Le Bescot,Noan Le Bescot,Ian Probert,Ian Probert,Margaux Carmichael,Margaux Carmichael,Margaux Carmichael,Julie Poulain,Sarah Romac,Sarah Romac,Sébastien Colin,Sébastien Colin,Sébastien Colin,Jean-Marc Aury,Lucie Bittner,Samuel Chaffron,Samuel Chaffron,Micah Dunthorn,Stefan Engelen,Olga Flegontova,Olga Flegontova,Lionel Guidi,Lionel Guidi,Aleš Horák,Aleš Horák,Olivier Jaillon,Olivier Jaillon,Olivier Jaillon,Gipsi Lima-Mendez,Gipsi Lima-Mendez,Julius Lukeš,Julius Lukeš,Julius Lukeš,Shruti Malviya,Raphael Morard,Raphael Morard,Raphael Morard,Matthieu Mulot,Eleonora Scalco,Raffaele Siano,Flora Vincent,Flora Vincent,Adriana Zingone,Céline Dimier,Céline Dimier,Céline Dimier,Marc Picheral,Marc Picheral,Sarah Searson,Sarah Searson,Stefanie Kandels-Lewis,Tara Oceans Coordinators,Silvia G. Acinas,Peer Bork,Peer Bork,Chris Bowler,Gabriel Gorsky,Gabriel Gorsky,Nigel Grimsley,Nigel Grimsley,Pascal Hingamp,Daniele Iudicone,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Stephane Pesant,Jeroen Raes,Jeroen Raes,Michael E. Sieracki,Michael E. Sieracki,Sabrina Speich,Sabrina Speich,Lars Stemmann,Lars Stemmann,Shinichi Sunagawa,Jean Weissenbach,Jean Weissenbach,Jean Weissenbach,Patrick Wincker,Patrick Wincker,Patrick Wincker,Eric Karsenti,Eric Karsenti +97 more
TL;DR: Diversity emerged at all taxonomic levels, both within the groups comprising the ~11,200 cataloged morphospecies of eukaryotic plankton and among twice as many other deep-branching lineages of unappreciated importance in plankton ecology studies.
Journal ArticleDOI
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
Laure Guillou,Dipankar Bachar,Stéphane Audic,David Bass,Cédric Berney,Lucie Bittner,Christophe Boutte,Gaëtan Burgaud,Colomban de Vargas,Johan Decelle,Javier del Campo,John R. Dolan,Micah Dunthorn,Bente Edvardsen,Maria Holzmann,Wiebe H. C. F. Kooistra,Enrique Lara,Noan Le Bescot,Ramiro Logares,Frédéric Mahé,Ramon Massana,Marina Montresor,Raphael Morard,Fabrice Not,Jan Pawlowski,Ian Probert,Anne Laure Sauvadet,Raffaele Siano,Thorsten Stoeck,Daniel Vaulot,Pascal Zimmermann,Richard Christen +31 more
TL;DR: The presence of both rRNA and rDNA sequences, taking into account introns (crucial for eukaryotic sequences), a normalized eight terms ranked-taxonomy and updates of new GenBank releases were made possible by a long-term collaboration between experts in taxonomy and computer scientists.
Journal ArticleDOI
Patterns of Rare and Abundant Marine Microbial Eukaryotes
Ramiro Logares,Stéphane Audic,Stéphane Audic,David Bass,Lucie Bittner,Lucie Bittner,Lucie Bittner,Christophe Boutte,Christophe Boutte,Richard Christen,Richard Christen,Jean-Michel Claverie,Johan Decelle,Johan Decelle,John R. Dolan,Micah Dunthorn,Bente Edvardsen,Angélique Gobet,Angélique Gobet,Wiebe H. C. F. Kooistra,Frédéric Mahé,Frédéric Mahé,Frédéric Mahé,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Hiroyuki Ogata,Jan Pawlowski,Massimo C. Pernice,Sarah Romac,Sarah Romac,Kamran Shalchian-Tabrizi,Nathalie Simon,Nathalie Simon,Thorsten Stoeck,Sébastien Santini,Raffaele Siano,Patrick Wincker,Adriana Zingone,Thomas A. Richards,Colomban de Vargas,Colomban de Vargas,Ramon Massana +42 more
TL;DR: The authors investigated abundant and rare subcommunities of marine microbial eukaryotes, a crucial group of organisms that remains among the least-explored biodiversity components of the biosphere.
Article Patterns of Rare and Abundant Marine Microbial Eukaryotes
Ramiro Logares,David Bass,Lucie Bittner,Christophe Boutte,Richard Christen,Jean-Michel Claverie,Johan Decelle,John R. Dolan,Micah Dunthorn,Bente Edvardsen,Fabrice Not,Hiroyuki Ogata,Jan Pawlowski,Massimo C. Pernice,Sarah Romac,Kamran Shalchian-Tabrizi,Nathalie Simon,Thorsten Stoeck,Raffaele Siano,Patrick Wincker,Adriana Zingone,Thomas A. Richards,Colomban de Vargas,Ramon Massana,Parc Valrose,Villa Comunale +25 more
TL;DR: It is proposed that marine planktonic microeukaryote assemblages incorporate dynamic and metabolically active abundant and rare subcommunities, with contrasting structuring patterns but fairly regular proportions, across space and time.
Journal ArticleDOI
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing
Ramon Massana,Angélique Gobet,Angélique Gobet,Stéphane Audic,Stéphane Audic,David Bass,David Bass,Lucie Bittner,Lucie Bittner,Lucie Bittner,Christophe Boutte,Christophe Boutte,Aurélie Chambouvet,Richard Christen,Jean-Michel Claverie,Johan Decelle,Johan Decelle,John R. Dolan,Micah Dunthorn,Bente Edvardsen,Irene Forn,Dominik Forster,Laure Guillou,Laure Guillou,Olivier Jaillon,Wiebe H. C. F. Kooistra,Ramiro Logares,Frédéric Mahé,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Jan Pawlowski,Massimo C. Pernice,Ian Probert,Ian Probert,Sarah Romac,Sarah Romac,Thomas A. Richards,Sébastien Santini,Kamran Shalchian-Tabrizi,Raffaele Siano,Nathalie Simon,Nathalie Simon,Thorsten Stoeck,Daniel Vaulot,Daniel Vaulot,Adriana Zingone,Colomban de Vargas,Colomban de Vargas +48 more
TL;DR: This extensive and systematic sequencing of geographically separated sites provides the most comprehensive molecular description of coastal marine protist diversity to date.