R
Ryan F. Bloomquist
Researcher at Georgia Regents University
Publications - 23
Citations - 2156
Ryan F. Bloomquist is an academic researcher from Georgia Regents University. The author has contributed to research in topics: Cichlid & Medicine. The author has an hindex of 9, co-authored 18 publications receiving 1874 citations. Previous affiliations of Ryan F. Bloomquist include Georgia Institute of Technology & Parker H. Petit Institute for Bioengineering & Bioscience.
Papers
More filters
Journal ArticleDOI
The genomic substrate for adaptive radiation in African cichlid fish
David Brawand,David Brawand,Catherine E. Wagner,Catherine E. Wagner,Yang I. Li,Milan Malinsky,Milan Malinsky,Irene Keller,Shaohua Fan,Oleg Simakov,Alvin Yu Jin Ng,Zhi Wei Lim,Etienne Bezault,Jason Turner-Maier,Jeremy A. Johnson,Rosa Alcazar,Hyun Ji Noh,Pamela Russell,Bronwen Aken,Jessica Alföldi,Chris T. Amemiya,Naoual Azzouzi,Jean-François Baroiller,Frédérique Barloy-Hubler,Aaron M. Berlin,Ryan F. Bloomquist,Karen L. Carleton,Matthew A. Conte,Helena D'Cotta,Orly Eshel,Leslie Gaffney,Francis Galibert,Hugo F. Gante,Sante Gnerre,Lucie Greuter,Lucie Greuter,Richard Guyon,Natalie S. Haddad,Wilfried Haerty,Robert M Harris,Hans A. Hofmann,Thibaut Hourlier,Gideon Hulata,David B. Jaffe,Marcia Lara,Alison P. Lee,Iain MacCallum,Salome Mwaiko,Masato Nikaido,Hidenori Nishihara,Catherine Ozouf-Costaz,David J. Penman,Dariusz Przybylski,Michaelle Rakotomanga,Suzy C. P. Renn,Filipe J. Ribeiro,Micha Ron,Walter Salzburger,Luis Sanchez-Pulido,M. Emília Santos,Steve Searle,Ted Sharpe,Ross Swofford,Frederick J. Tan,Louise Williams,Sarah Young,Shuangye Yin,Norihiro Okada,Norihiro Okada,Thomas D. Kocher,Eric A. Miska,Eric S. Lander,Byrappa Venkatesh,Russell D. Fernald,Axel Meyer,Chris P. Ponting,J. Todd Streelman,Kerstin Lindblad-Toh,Kerstin Lindblad-Toh,Ole Seehausen,Ole Seehausen,Federica Di Palma,Federica Di Palma +82 more
TL;DR: This article found an excess of gene duplications in the East African lineage compared to Nile tilapia and other teleosts, an abundance of non-coding element divergence, accelerated coding sequence evolution, expression divergence associated with transposable element insertions, and regulation by novel microRNAs.
The genomic substrate for adaptive radiation in African cichlid fish
David Brawand,David Brawand,Catherine E. Wagner,Catherine E. Wagner,Yang I. Li,Milan Malinsky,Milan Malinsky,Irene Keller,Shaohua Fan,Oleg Simakov,Alvin Yu Jin Ng,Zhi Wei Lim,Etienne Bezault,Jason Turner-Maier,Jeremy A. Johnson,Rosa Alcazar,Hyun Ji Noh,Pamela Russell,Bronwen Aken,Jessica Alföldi,Chris T. Amemiya,Naoual Azzouzi,Jean-François Baroiller,Frédérique Barloy-Hubler,Aaron M. Berlin,Ryan F. Bloomquist,Karen L. Carleton,Matthew A. Conte,Helena D'Cotta,Orly Eshel,Leslie Gaffney,Francis Galibert,Hugo F. Gante,Sante Gnerre,Lucie Greuter,Lucie Greuter,Richard Guyon,Natalie S. Haddad,Wilfried Haerty,Robert M Harris,Hans A. Hofmann,Thibaut Hourlier,Gideon Hulata,David B. Jaffe,Marcia Lara,Alison P. Lee,Iain MacCallum,Salome Mwaiko,Masato Nikaido,Hidenori Nishihara,Catherine Ozouf-Costaz,David J. Penman,Dariusz Przybylski,Michaelle Rakotomanga,Suzy C. P. Renn,Filipe J. Ribeiro,Micha Ron,Walter Salzburger,Luis Sanchez-Pulido,M. Emília Santos,Steve Searle,Ted Sharpe,Ross Swofford,Frederick J. Tan,Louise Williams,Sarah Young,Shuangye Yin,Norihiro Okada,Norihiro Okada,Thomas D. Kocher,Eric A. Miska,Eric S. Lander,Byrappa Venkatesh,Russell D. Fernald,Axel Meyer,Chris P. Ponting,J. Todd Streelman,Kerstin Lindblad-Toh,Kerstin Lindblad-Toh,Ole Seehausen,Ole Seehausen,Federica Di Palma,Federica Di Palma +82 more
TL;DR: It is concluded that a number of molecular mechanisms shaped East African cichlid genomes, and that amassing of standing variation during periods of relaxed purifying selection may have been important in facilitating subsequent evolutionary diversification.
Journal ArticleDOI
An Ancient Gene Network Is Co-Opted for Teeth on Old and New Jaws
Gareth J. Fraser,C. Darrin Hulsey,C. Darrin Hulsey,Ryan F. Bloomquist,Kristine Uyesugi,Nancy R. Manley,J. Todd Streelman +6 more
TL;DR: It is shown that tooth number is correlated on oral and pharyngeal jaws across species of cichlid fishes from Lake Malawi (East Africa), suggestive of common regulatory mechanisms for tooth initiation and an amazing modularity of jaws and teeth as they coevolved during the history of vertebrates.
Journal ArticleDOI
A periodic pattern generator for dental diversity.
TL;DR: The molecular analysis of oral jaw dental diversity in Lake Malawi cichlids shows how a complex multi-rowed vertebrate dentition is organized and how developmental tinkering of conserved gene networks during iterative pattern formation can impact upon the evolution of trophic novelty.
Journal ArticleDOI
Common developmental pathways link tooth shape to regeneration
TL;DR: The dissection of the molecular mechanics of vertebrate tooth replacement coupled to complex shape pinpoints aspects of odontogenesis that might be re-evolved in the lab to solve problems in regenerative dentistry.