S
Saurav Singh
Researcher at Harvard University
Publications - 6
Citations - 495
Saurav Singh is an academic researcher from Harvard University. The author has contributed to research in topics: Genome & Comparative genomics. The author has an hindex of 4, co-authored 5 publications receiving 460 citations.
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Journal ArticleDOI
Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins
Orit Rozenblatt-Rosen,Rahul C. Deo,Rahul C. Deo,Megha Padi,Guillaume Adelmant,Michael A. Calderwood,Thomas Rolland,Miranda Grace,Miranda Grace,Amélie Dricot,Manor Askenazi,Maria Tavares,Sam Pevzner,Sam Pevzner,Fieda Abderazzaq,Danielle Byrdsong,Anne-Ruxandra Carvunis,Alyce A. Chen,Alyce A. Chen,Jingwei Cheng,Jingwei Cheng,Mick Correll,Melissa Duarte,Melissa Duarte,Changyu Fan,Mariet C.W. Feltkamp,Scott B. Ficarro,Rachel Franchi,Rachel Franchi,Brijesh K. Garg,Natali Gulbahce,Tong Hao,Amy M. Holthaus,Amy M. Holthaus,Robert James,Anna Korkhin,Anna Korkhin,Larisa Litovchick,Larisa Litovchick,Jessica C. Mar,Theodore R. Pak,Sabrina Rabello,Renee Rubio,Yun Shen,Saurav Singh,Jennifer M. Spangle,Jennifer M. Spangle,Murat Tasan,Murat Tasan,Shelly Wanamaker,Shelly Wanamaker,James T. Webber,Jennifer Roecklein-Canfield,Jennifer Roecklein-Canfield,Eric Johannsen,Eric Johannsen,Albert-László Barabási,Rameen Beroukhim,Rameen Beroukhim,Rameen Beroukhim,Elliott Kieff,Elliott Kieff,Michael E. Cusick,David E. Hill,Karl Münger,Karl Münger,Jarrod A. Marto,John Quackenbush,Frederick P. Roth,James A. DeCaprio,James A. DeCaprio,Marc Vidal +71 more
TL;DR: It is shown that systematic analyses of host targets of viral proteins can identify cancer genes with a success rate on a par with their identification through functional genomics and large-scale cataloguing of tumour mutations, to increase the specificity of cancer gene identification.
Journal ArticleDOI
Roundup: a multi-genome repository of orthologs and evolutionary distances
TL;DR: Roundup is a tool for ortholog and phylogenetic profile retrieval that was built using the reciprocal smallest distance algorithm, an approach that has been shown to improve upon alternative approaches of ortholog detection, such as reciprocal blast.
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Pathway Palette: a rich internet application for peptide-, protein- and network-oriented analysis of MS data.
TL;DR: Pathway Palette is described, a freely accessible internet application that enables researchers to easily transition from peptides to biological pathways, while simultaneously retaining the qualitative and quantitative aspects of the underlying MS data.
Journal ArticleDOI
Testing the accuracy of eukaryotic phylogenetic profiles for prediction of biological function.
Saurav Singh,Dennis P. Wall +1 more
TL;DR: A straightforward approach is developed to address the question of how the size and content of the phylogenetic profile impacts the ability to predict function in Eukaryotes by constructing a complete set of phylogenetic profiles for 31 fully sequenced EUKaryotes.
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ResNet-50 based deep neural network using transfer learning for brain tumor classification
TL;DR: In this paper , transfer learning was used for multi-class classification of brain tumor using pre-trained ResNet50 model using CNN architecture, which achieved an accuracy of 95.3%.