S
Susan M. Bridges
Researcher at Mississippi State University
Publications - 101
Citations - 4174
Susan M. Bridges is an academic researcher from Mississippi State University. The author has contributed to research in topics: Annotation & Intrusion detection system. The author has an hindex of 32, co-authored 101 publications receiving 3922 citations.
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Journal ArticleDOI
Gene ontology annotations and resources
Judith A. Blake,Mary E. Dolan,H. Drabkin,David P. Hill,Li N,D. Sitnikov,Susan M. Bridges,Shane C. Burgess,Teresia Buza,Fiona M. McCarthy,Divyaswetha Peddinti,Lakshmi Pillai,Seth Carbon,Heiko Dietze,Amelia Ireland,Suzanna E. Lewis,Christopher J. Mungall,Pascale Gaudet,Chrisholm Rl,Petra Fey,Warren A. Kibbe,S. Basu,Deborah A. Siegele,B. K. McIntosh,Daniel P. Renfro,Adrienne E. Zweifel,James C. Hu,Nicholas H. Brown,Susan Tweedie,Yasmin Alam-Faruque,Rolf Apweiler,A. Auchinchloss,Kristian B. Axelsen,Benoit Bely,M. C. Blatter,Bonilla C,Bouguerleret L,Emmanuel Boutet,Lionel Breuza,Alan Bridge,W. M. Chan,Gayatri Chavali,Elisabeth Coudert,E. Dimmer,Anne Estreicher,L Famiglietti,Marc Feuermann,Arnaud Gos,Nadine Gruaz-Gumowski,Hieta R,Hinz C,Chantal Hulo,Rachael P. Huntley,J. James,Florence Jungo,Guillaume Keller,Kati Laiho,Duncan Legge,P. Lemercier,Damien Lieberherr,Michele Magrane,Maria Jesus Martin,Patrick Masson,Mutowo-Muellenet P,Claire O'Donovan,Ivo Pedruzzi,Klemens Pichler,Diego Poggioli,Porras Millán P,Sylvain Poux,Catherine Rivoire,Bernd Roechert,Tony Sawford,Michel Schneider,Andre Stutz,Shyamala Sundaram,Michael Tognolli,Ioannis Xenarios,Foulgar R,Jane Lomax,Paola Roncaglia,Varsha K. Khodiyar,Ruth C. Lovering,Philippa J. Talmud,Marcus C. Chibucos,Giglio Mg,Hsin-Yu Chang,Sarah Hunter,Craig McAnulla,Alex L. Mitchell,Sangrador A,Stephan R,Midori A. Harris,Stephen G. Oliver,Kim Rutherford,Wood,Jürg Bähler,Antonia Lock,Paul J. Kersey,McDowall Dm,Daniel M. Staines,Melinda R. Dwinell,Mary Shimoyama,Stan Laulederkind,Tom Hayman,Shur-Jen Wang,Timothy F. Lowry,P D'Eustachio,Lisa Matthews,Rama Balakrishnan,Gail Binkley,J. M. Cherry,Maria C. Costanzo,Selina S. Dwight,Engel,Dianna G. Fisk,Benjamin C. Hitz,Eurie L. Hong,Kalpana Karra,Miyasato,Robert S. Nash,Julie Park,Marek S. Skrzypek,Shuai Weng,Edith D. Wong,Tanya Z. Berardini,Eva Huala,Huaiyu Mi,Paul Thomas,Juancarlos Chan,Ranjana Kishore,Paul W. Sternberg,Van Auken K,Doug Howe,Monte Westerfield +134 more
TL;DR: The Gene Ontology (GO) Consortium is a community-based bioinformatics resource that classifies gene product function through the use of structured, controlled vocabularies and has been expanded not only to cover new areas of biology through focused interaction with experts, but also to capture greater specificity in all areas of the ontology.
The Gene Ontology in 2010: extensions and refinements The Gene Ontology Consortium
Tanya Z. Berardini,Dong Li,Eva Huala,Susan M. Bridges,Shane C. Burgess,Fiona M. McCarthy,Seth Carbon,Suzanna E. Lewis,Christopher J. Mungall,A Abdulla,Wood,Erika Feltrin,Giorgio Valle,Rex L. Chisholm,Petra Fey,P Gaudet,Warren A. Kibbe,S. Basu,Y Bushmanova,Karen Eilbeck,Deborah A. Siegele,B. K. McIntosh,Daniel P. Renfro,Adrienne E. Zweifel,James C. Hu,Michael Ashburner,Susan Tweedie,Yasmin Alam-Faruque,Rolf Apweiler,A. Auchinchloss,A Bairoch,Daniel Barrell,David Binns,M. C. Blatter,Lydie Bougueleret,Emmanuel Boutet,Lionel Breuza,Alan Bridge,Paul Browne,W. M. Chan,Elisabeth Coudert,L Daugherty,E. Dimmer,Ruth Y. Eberhardt,Anne Estreicher,L Famiglietti,S. Ferro-Rojas,M Feuermann,Rebecca E. Foulger,Nadine Gruaz-Gumowski,Ursula Hinz,Rachael P. Huntley,S. Jimenez,Florence Jungo,Guillaume Keller,Kati Laiho,Duncan Legge,P Lemercier,Damien Lieberherr,Michele Magrane,Claire O'Donovan,Ivo Pedruzzi,Sylvain Poux,Catherine Rivoire,Bernd Roechert,Tony Sawford,Maria Victoria Schneider,Eleanor J Stanley,Andre Stutz,Shyamala Sundaram,Michael Tognolli,Ioannis Xenarios,Midori A. Harris,Jennifer I. Deegan,Amelia Ireland,Jane Lomax,Pankaj Jaiswal,Marcus C. Chibucos,Michelle G. Giglio,Jennifer R. Wortman,Linda Hannick,R Madupu,David Botstein,Kara Dolinski,Livstone,Rose Oughtred,Judith A. Blake,Carol J. Bult,Alexander D. Diehl,Mary E. Dolan,H. Drabkin,Janan T. Eppig,David P. Hill,L. Ni,Martin Ringwald,D. Sitnikov,C Collmer,T Torto-Alalibo,Stan Laulederkind,Mary Shimoyama,Simon N. Twigger,P D'Eustachio,Lisa Matthews,Rama Balakrishnan,Gail Binkley,J. M. Cherry,Karen R. Christie,Maria C. Costanzo,Engel,Dianna G. Fisk,Jodi E. Hirschman,Benjamin C. Hitz,El Hong,Cynthia J. Krieger,Miyasato,Robert S. Nash,Julie Park,Skrzypek,Sa Weng,Edith D. Wong,Martin Aslett,Juancarlos Chan,Ranjana Kishore,Paul W. Sternberg,K. Van Auken,Varsha K. Khodiyar,Ruth C. Lovering,P.J. Talmud,Doug Howe,Monte Westerfield +129 more
TL;DR: The Gene Ontology (GO) Consortium continues to develop, maintain and use a set of structured, controlled vocabularies for the annotation of genes, gene products and sequences and several new relationship types have been introduced and used to create links between and within the GO domains.
Journal ArticleDOI
AgBase: a functional genomics resource for agriculture
Fiona M. McCarthy,Nan Wang,G Bryce Magee,Bindu Nanduri,Mark L. Lawrence,Evelyn Camon,Daniel Barrell,David P Hill,Mary E. Dolan,W. Paul Williams,Dawn S. Luthe,Susan M. Bridges,Shane C. Burgess +12 more
TL;DR: The AgBase database is the first database dedicated to functional genomics and systems biology analysis for agriculturally important species and their pathogens and uses experimental data to improve structural annotation of genomes and to functionally characterize gene products.
Fuzzy data mining and genetic algorithms applied to intrusion detection
TL;DR: A prototype intelligent intrusion detection system that combines both anomaly based intrusion detection using fuzzy data mining techniques and misuse detection using traditional rule-based expert system techniques is developed.
Journal ArticleDOI
Empirical comparison of ab initio repeat finding programs
TL;DR: Side-by-side evaluations of six of the most widely used ab initio repeat finding programs reveal profound differences in the utility with some identifying virtually their entire substrate as repetitive, others making reasonable estimates of repetition, and some missing almost all repeats.