U
Uros Krzic
Researcher at European Bioinformatics Institute
Publications - 21
Citations - 1437
Uros Krzic is an academic researcher from European Bioinformatics Institute. The author has contributed to research in topics: Microscope & Light sheet fluorescence microscopy. The author has an hindex of 12, co-authored 21 publications receiving 1168 citations. Previous affiliations of Uros Krzic include Carl Zeiss AG.
Papers
More filters
Journal ArticleDOI
Multiview light-sheet microscope for rapid in toto imaging
TL;DR: The high speed of MuVi-SPIM allows faithful tracking of nuclei and cell shape changes, which is demonstrated through in toto imaging of the embryonic development of Drosophila melanogaster.
Journal ArticleDOI
A Holistic Approach to Marine Eco-Systems Biology
Eric Karsenti,Silvia G. Acinas,Peer Bork,Chris Bowler,Chris Bowler,Colomban de Vargas,Colomban de Vargas,Jeroen Raes,Matthew B. Sullivan,Detlev Arendt,Francesca Benzoni,Jean-Michel Claverie,Jean-Michel Claverie,Mick Follows,G. Gorsky,G. Gorsky,Pascal Hingamp,Pascal Hingamp,Daniele Iudicone,Olivier Jaillon,Stefanie Kandels-Lewis,Uros Krzic,Fabrice Not,Fabrice Not,Hiroyuki Ogata,Hiroyuki Ogata,Stephane Pesant,Emmanuel G. Reynaud,Christian Sardet,Christian Sardet,Michael E. Sieracki,Sabrina Speich,Didier Velayoudon,Jean Weissenbach,Patrick Wincker +34 more
TL;DR: The structure, robustness, and dynamics of ocean plankton ecosystems remain poorly understood due to sampling, analysis, and computational limitations, and the Tara Oceans consortium organizes expeditions to help fill this gap.
Journal ArticleDOI
Embryo-scale tissue mechanics during Drosophila gastrulation movements.
Matteo Rauzi,Uros Krzic,Timothy E. Saunders,Matej Krajnc,Primož Ziherl,Primož Ziherl,Primož Ziherl,Lars Hufnagel,Maria Leptin +8 more
TL;DR: It is shown that lateral cells have a denser medial–apical actomyosin network and shift ventrally as a compact cohort, whereas dorsal cells become stretched, and that the behaviour of these cells affects furrow internalization.
Journal ArticleDOI
Inverted light-sheet microscope for imaging mouse pre-implantation development
Petr Strnad,Stefan Gunther,Judith Reichmann,Uros Krzic,Bálint Balázs,Gustavo de Medeiros,Nils Norlin,Takashi Hiiragi,Lars Hufnagel,Jan Ellenberg +9 more
TL;DR: An inverted light-sheet microscope is developed that is able to image mouse embryos from zygote to blastocyst, computationally track all cells and reconstruct a complete lineage tree of mouse pre-implantation development, and shows that the first cell fate specification occurs at the 16-cell stage.
Journal ArticleDOI
Confocal multiview light-sheet microscopy.
Gustavo de Medeiros,Nils Norlin,Stefan Gunther,Marvin Albert,Laura Panavaite,Ulla-Maj Fiuza,Francesca Peri,Takashi Hiiragi,Uros Krzic,Lars Hufnagel +9 more
TL;DR: This work combines multiview light-sheet imaging with electronic confocal slit detection implemented on modern camera sensors, eliminating the need for specimen-specific data fusion algorithms, streamlines image post-processing, easing data handling and storage.