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Yuan Fu
Publications - 13
Citations - 1001
Yuan Fu is an academic researcher. The author has contributed to research in topics: Genome & DNA sequencing. The author has an hindex of 8, co-authored 12 publications receiving 601 citations.
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Journal ArticleDOI
Phylogenomics reveals multiple losses of nitrogen-fixing root nodule symbiosis
Maximilian Griesmann,Yue Chang,Xin Liu,Yue Song,Georg Haberer,Matthew B. Crook,Benjamin Billault-Penneteau,Dominique Lauressergues,Jean Keller,Leandro Imanishi,Yuda Purwana Roswanjaya,Wouter Kohlen,Petar Pujic,Kai Battenberg,Nicole Alloisio,Yuhu Liang,Henk W. M. Hilhorst,Marco G. Salgado,Valérie Hocher,Hassen Gherbi,Sergio Svistoonoff,Jeff J. Doyle,Shixu He,Yan Xu,Shanyun Xu,Jing Qu,Qiang Gao,Xiaodong Fang,Yuan Fu,Philippe Normand,Alison M. Berry,Luis Gabriel Wall,Jean-Michel Ané,Katharina Pawlowski,Xun Xu,Huanming Yang,Manuel Spannagl,Klaus F. X. Mayer,Gane Ka-Shu Wong,Martin Parniske,Pierre-Marc Delaux,Shifeng Cheng +41 more
TL;DR: Molecular evidence is used to ask how the current pattern of plant species with NFN symbiosis evolved and to suggest that this symbiosis is subject to an underestimated adverse selection pressure.
Journal ArticleDOI
Genomes of Subaerial Zygnematophyceae Provide Insights into Land Plant Evolution.
Shifeng Cheng,Wenfei Xian,Yuan Fu,Birger Marin,Jean Keller,Tian Wu,Wenjing Sun,Xiuli Li,Yan Xu,Yu Zhang,Sebastian Wittek,Tanja Reder,Gerd Günther,Andrey A. Gontcharov,Sibo Wang,Linzhou Li,Xin Liu,Jian Wang,Huanming Yang,Xun Xu,Pierre-Marc Delaux,Barbara Melkonian,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Michael Melkonian +24 more
TL;DR: Evidence that genes that increase resistance to biotic and abiotic stresses in land plants, in particular desiccation, originated or expanded in the common ancestor of Zygnematophyceae and embryophytes are provided, and were gained by horizontal gene transfer from soil bacteria.
Journal ArticleDOI
10KP: A phylodiverse genome sequencing plan.
Shifeng Cheng,Michael Melkonian,Stephen A. Smith,Samuel F. Brockington,John M. Archibald,Pierre-Marc Delaux,Fay-Wei Li,Barbara Melkonian,Evgeny V. Mavrodiev,Wenjing Sun,Yuan Fu,Huanming Yang,Douglas E. Soltis,Douglas E. Soltis,Sean W. Graham,Pamela S. Soltis,Pamela S. Soltis,Xin Liu,Xun Xu,Gane Ka-Shu Wong +19 more
TL;DR: The 10KP (10,000 Plants) Genome Sequencing Project will sequence and characterize representative genomes from every major clade of embryophytes, green algae, and protists (excluding fungi) within the next 5 years.
Journal ArticleDOI
The draft genomes of five agriculturally important African orphan crops.
Yue Chang,Huan Liu,Min Liu,Xuezhu Liao,Sunil Kumar Sahu,Yuan Fu,Bo Song,Shifeng Cheng,Robert Kariba,Samuel Muthemba,Prasad S. Hendre,Sean Mayes,Sean Mayes,Wai Kuan Ho,Anna Yssel,Presidor Kendabie,Sibo Wang,Linzhou Li,Alice Muchugi,Ramni Jamnadass,Haorong Lu,Shufeng Peng,Allen Van Deynze,Allen Van Deynze,A. J. Simons,Howard Yana-Shapiro,Howard Yana-Shapiro,Yves Van de Peer,Yves Van de Peer,Xun Xu,Huanming Yang,Jian Wang,Xin Liu +32 more
TL;DR: Draft genome information for five agriculturally, biologically, medicinally, and economically important underutilized plants native to Africa will be useful to identify and characterize agronomically important genes and understand their modes of action, enabling genomics-based, evolutionary studies, and breeding strategies to design faster, more focused, and predictable crop improvement programs.
Journal ArticleDOI
African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops.
Prasad S. Hendre,Samuel Muthemba,Robert Kariba,Alice Muchugi,Yuan Fu,Yue Chang,Bo Song,Huan Liu,Min Liu,Xuezhu Liao,Sunil Kumar Sahu,Sibo Wang,Linzhou Li,Haorong Lu,Shufeng Peng,Shifeng Cheng,Xun Xu,Huanming Yang,Jian Wang,Xin Liu,A. J. Simons,Howard-Yana Shapiro,Howard-Yana Shapiro,Rita H. Mumm,Allen Van Deynze,Ramni Jamnadass +25 more
TL;DR: The African Orphan Crops Consortium (AOCC) successfully initiated the ambitious genome sequencing project of 101 African orphan crops/trees with 6 genomes sequenced, 6 near completion, and 20 currently in progress.