Journal ArticleDOI
Bacterial profiles and volatile flavor compounds in commercial Suancai with varying salt concentration from Northeastern China
Reads0
Chats0
TLDR
A perspective for understanding the ecology of Suancai fermentation and facilitating the fermentation with multispecies inoculation fermentation at an appropriate salt concentration is provided.About:
This article is published in Food Research International.The article was published on 2020-06-04. It has received 36 citations till now. The article focuses on the topics: Pediococcus & Fermentation.read more
Citations
More filters
Journal ArticleDOI
Pediococcus pentosaceus, a future additive or probiotic candidate.
TL;DR: Pediococcus pentosaceus, a promising strain of lactic acid bacteria (LAB), is gradually attracting attention, leading to a rapid increase in experimental research as discussed by the authors.
Journal ArticleDOI
Metagenomics unveils microbial roles involved in metabolic network of flavor development in medium-temperature daqu starter.
Yang Yang,Wang Songtao,Zhen-Ming Lu,Xiaojuan Zhang,Chai Lijuan,Cai-Hong Shen,Jin-Song Shi,Zhenghong Xu +7 more
TL;DR: In this article, the authors investigated the microbial metabolic network involved in flavor development in Asian starter cultures and found that Lactobacillales and Eurotiales were the potential predominant populations successively responsible for the production of lytic enzymes and flavor precursors/compounds.
Journal ArticleDOI
Contribution of microbial community to flavor formation in tilapia sausage during fermentation with Pediococcus pentosaceus
Chunsheng Li,Yue Zhao,Yueqi Wang,Laihao Li,Jianlian Huang,Xianqing Yang,Xianqing Yang,Shengjun Chen,Shengjun Chen,Yongqiang Zhao,Yongqiang Zhao +10 more
TL;DR: In this paper, the changes of volatile compounds and microbial community in the tilapia sausage during fermentation with Pediococcus pentosaceus were respectively studied by the headspace solid-phase microextraction gas chromatography-mass spectrometry and 16S rRNA gene high-throughput sequencing.
Journal ArticleDOI
Contribution of microbial community to flavor formation in tilapia sausage during fermentation with Pediococcus pentosaceus
TL;DR: In this article , the changes of volatile compounds and microbial community in the tilapia sausage during fermentation with Pediococcus pentosaceus were respectively studied by the headspace solid-phase microextraction gas chromatography-mass spectrometry and 16S rRNA gene high-throughput sequencing.
Journal ArticleDOI
Probiotic and related properties of a novel lactic acid bacteria strain isolated from fermented rose jam
Ao-Nan Xia,Ao-Nan Xia,Xian-Shui Meng,Xiao-Juan Tang,Yan-Zhen Zhang,Sheng-Ming Lei,Yun-Guo Liu +6 more
TL;DR: In this article, 61 strains of lactic acid bacteria (LAB) were isolated from ten spontaneously fermented rose jams and were screened through a series of in vitro probiotic tests, including resistance to low pH, bile salts, simulated gastric and simulated pancreatic digestion, as well as antibiotic susceptibility.
References
More filters
Journal ArticleDOI
Trimmomatic: a flexible trimmer for Illumina sequence data
TL;DR: Timmomatic is developed as a more flexible and efficient preprocessing tool, which could correctly handle paired-end data and is shown to produce output that is at least competitive with, and in many cases superior to, that produced by other tools, in all scenarios tested.
Journal ArticleDOI
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon,Andrew Markiel,Owen Ozier,Nitin S. Baliga,Jonathan T. Wang,Daniel Ramage,Nada Amin,Benno Schwikowski,Trey Ideker +8 more
TL;DR: Several case studies of Cytoscape plug-ins are surveyed, including a search for interaction pathways correlating with changes in gene expression, a study of protein complexes involved in cellular recovery to DNA damage, inference of a combined physical/functional interaction network for Halobacterium, and an interface to detailed stochastic/kinetic gene regulatory models.
Journal ArticleDOI
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss,Patrick D. Schloss,Sarah L. Westcott,Sarah L. Westcott,Thomas Ryabin,Justine R. Hall,Martin Hartmann,Emily B. Hollister,Ryan A. Lesniewski,Brian B. Oakley,Donovan H. Parks,Courtney J. Robinson,Jason W. Sahl,Blaz Stres,Gerhard G. Thallinger,David J. Van Horn,Carolyn F. Weber +16 more
TL;DR: M mothur is used as a case study to trim, screen, and align sequences; calculate distances; assign sequences to operational taxonomic units; and describe the α and β diversity of eight marine samples previously characterized by pyrosequencing of 16S rRNA gene fragments.
Journal ArticleDOI
FLASH: Fast Length Adjustment of Short Reads to Improve Genome Assemblies
Tanja Magoc,Steven L. Salzberg +1 more
TL;DR: FLASH is a fast computational tool to extend the length of short reads by overlapping paired-end reads from fragment libraries that are sufficiently short and when FLASH was used to extend reads prior to assembly, the resulting assemblies had substantially greater N50 lengths for both contigs and scaffolds.
Journal ArticleDOI
HemI: a toolkit for illustrating heatmaps.
TL;DR: An easy-to-use tool named HemI (Heat map Illustrator), which can visualize either gene or protein expression data in heatmaps and provides multiple clustering strategies for analyzing the data.