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Graph convolutional networks: a comprehensive review

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TLDR
A comprehensive review specifically on the emerging field of graph convolutional networks, which is one of the most prominent graph deep learning models, is conducted and several open challenges are presented and potential directions for future research are discussed.
Abstract
Graphs naturally appear in numerous application domains, ranging from social analysis, bioinformatics to computer vision. The unique capability of graphs enables capturing the structural relations among data, and thus allows to harvest more insights compared to analyzing data in isolation. However, it is often very challenging to solve the learning problems on graphs, because (1) many types of data are not originally structured as graphs, such as images and text data, and (2) for graph-structured data, the underlying connectivity patterns are often complex and diverse. On the other hand, the representation learning has achieved great successes in many areas. Thereby, a potential solution is to learn the representation of graphs in a low-dimensional Euclidean space, such that the graph properties can be preserved. Although tremendous efforts have been made to address the graph representation learning problem, many of them still suffer from their shallow learning mechanisms. Deep learning models on graphs (e.g., graph neural networks) have recently emerged in machine learning and other related areas, and demonstrated the superior performance in various problems. In this survey, despite numerous types of graph neural networks, we conduct a comprehensive review specifically on the emerging field of graph convolutional networks, which is one of the most prominent graph deep learning models. First, we group the existing graph convolutional network models into two categories based on the types of convolutions and highlight some graph convolutional network models in details. Then, we categorize different graph convolutional networks according to the areas of their applications. Finally, we present several open challenges in this area and discuss potential directions for future research.

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Journal ArticleDOI

A novel candidate disease gene prioritization method using deep graph convolutional networks and semi-supervised learning

Saeid Azadifar, +1 more
- 14 Oct 2022 - 
TL;DR: In this paper , a semi-supervised learning method based on graph convolutional networks is presented using the novel constructing feature vector for each gene, which is characterized by the simultaneous consideration of topological information of the biological network and other sources of evidence.
Journal Article

Graph Convolutional Networks for Multi-modality Medical Imaging: Methods, Architectures, and Clinical Applications

TL;DR: This review shares rapid developments of graph convolutional networks in the context of medical image analysis including radiology, histopathology, and other related imaging modalities and discusses the fast-growing synergy of graph network architectures and medical imaging components to advance the assessment of disease status and outcome in clinical tasks.
Journal ArticleDOI

A User Segmentation Method in Heterogeneous Open Innovation Communities Based on Multilayer Information Fusion and Attention Mechanisms

TL;DR: This study provides methodological guidance for user segmentation based on structured community data and semantic social relations and provides insights for its practice in heterogeneous OICs.
Proceedings ArticleDOI

Computing Hierarchical Complexity of the Brain from Electroencephalogram Signals: A Graph Convolutional Network-based Approach

Tanu Wadhera, +1 more
TL;DR: Evidence suggests that graph networks can confidently reveal hierarchical imbalances in the brain functioning of ASD by developing a two-layered Visible-Graph Convolutional Network (VGCN) which projects each channel's EEG sample onto nodes of a graph with weighted edges formulated as per the hierarchical visibility among nodes.
Posted Content

Graph neural network initialisation of quantum approximate optimisation

TL;DR: In this article, the authors proposed graph neural networks (GNNs) as an initialisation routine for the QAOA parameters, adding to the literature on warm-starting techniques.
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Proceedings Article

Very Deep Convolutional Networks for Large-Scale Image Recognition

TL;DR: In this paper, the authors investigated the effect of the convolutional network depth on its accuracy in the large-scale image recognition setting and showed that a significant improvement on the prior-art configurations can be achieved by pushing the depth to 16-19 layers.
Proceedings ArticleDOI

Fully convolutional networks for semantic segmentation

TL;DR: The key insight is to build “fully convolutional” networks that take input of arbitrary size and produce correspondingly-sized output with efficient inference and learning.
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