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Graph convolutional networks: a comprehensive review

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TLDR
A comprehensive review specifically on the emerging field of graph convolutional networks, which is one of the most prominent graph deep learning models, is conducted and several open challenges are presented and potential directions for future research are discussed.
Abstract
Graphs naturally appear in numerous application domains, ranging from social analysis, bioinformatics to computer vision. The unique capability of graphs enables capturing the structural relations among data, and thus allows to harvest more insights compared to analyzing data in isolation. However, it is often very challenging to solve the learning problems on graphs, because (1) many types of data are not originally structured as graphs, such as images and text data, and (2) for graph-structured data, the underlying connectivity patterns are often complex and diverse. On the other hand, the representation learning has achieved great successes in many areas. Thereby, a potential solution is to learn the representation of graphs in a low-dimensional Euclidean space, such that the graph properties can be preserved. Although tremendous efforts have been made to address the graph representation learning problem, many of them still suffer from their shallow learning mechanisms. Deep learning models on graphs (e.g., graph neural networks) have recently emerged in machine learning and other related areas, and demonstrated the superior performance in various problems. In this survey, despite numerous types of graph neural networks, we conduct a comprehensive review specifically on the emerging field of graph convolutional networks, which is one of the most prominent graph deep learning models. First, we group the existing graph convolutional network models into two categories based on the types of convolutions and highlight some graph convolutional network models in details. Then, we categorize different graph convolutional networks according to the areas of their applications. Finally, we present several open challenges in this area and discuss potential directions for future research.

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References
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Proceedings Article

Gated Graph Sequence Neural Networks.

TL;DR: This work studies feature learning techniques for graph-structured inputs and achieves state-of-the-art performance on a problem from program verification, in which subgraphs need to be matched to abstract data structures.
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Graph Neural Networks: A Review of Methods and Applications

TL;DR: A detailed review over existing graph neural network models is provided, systematically categorize the applications, and four open problems for future research are proposed.
Journal ArticleDOI

Graph Embedding and Extensions: A General Framework for Dimensionality Reduction

TL;DR: A new supervised dimensionality reduction algorithm called marginal Fisher analysis is proposed in which the intrinsic graph characterizes the intraclass compactness and connects each data point with its neighboring points of the same class, while the penalty graph connects the marginal points and characterizing the interclass separability.
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Neural Message Passing for Quantum Chemistry

TL;DR: Using MPNNs, state of the art results on an important molecular property prediction benchmark are demonstrated and it is believed future work should focus on datasets with larger molecules or more accurate ground truth labels.
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Variational Graph Auto-Encoders

TL;DR: The variational graph auto-encoder (VGAE) is introduced, a framework for unsupervised learning on graph-structured data based on the variational auto- Encoder (VAE) that can naturally incorporate node features, which significantly improves predictive performance on a number of benchmark datasets.
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