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Open AccessJournal ArticleDOI

Interplay between Kinetics and Dynamics of Liquid-Liquid Phase Separation in a Protein Solution Revealed by Coherent X-ray Spectroscopy.

TLDR
In this paper, the authors used X-ray photon correlation spectroscopy to study the dynamics and kinetics of a protein solution undergoing liquid-liquid phase separation (LLPS) and demonstrated that in the early stage of spinodal decomposition, the kinetics relaxation is up to 40 times slower than the dynamics.
Abstract
Microscopic dynamics of complex fluids in the early stage of spinodal decomposition (SD) is strongly intertwined with the kinetics of structural evolution, which makes a quantitative characterization challenging. In this work, we use X-ray photon correlation spectroscopy to study the dynamics and kinetics of a protein solution undergoing liquid-liquid phase separation (LLPS). We demonstrate that in the early stage of SD, the kinetics relaxation is up to 40 times slower than the dynamics and thus can be decoupled. The microscopic dynamics can be well described by hyper-diffusive ballistic motions with a relaxation time exponentially growing with time in the early stage followed by a power-law increase with fluctuations. These experimental results are further supported by simulations based on the Cahn-Hilliard equation. The established framework is applicable to other condensed matter and biological systems undergoing phase transitions and may also inspire further theoretical work.

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Journal ArticleDOI

Automated matching of two-time X-ray photon correlation maps from phase-separating proteins with Cahn–Hilliard-type simulations using auto-encoder networks

TL;DR: In this article , machine learning methods are used for an automated classification of experimental two-time X-ray photon correlation maps from an arrested liquid-liquid phase separation of a protein solution.
Journal ArticleDOI

Reverse-engineering method for XPCS studies of non-equilibrium dynamics

- 28 May 2022 - 
TL;DR: In this paper , a reverse-engineering approach based on particle-based heuristic simulations is applied to an X-ray photon correlation spectroscopy measurement on a protein solution undergoing a liquid-liquid phase separation.
Journal ArticleDOI

Coherent X-ray Scattering Reveals Nanoscale Fluctuations in Hydrated Proteins

TL;DR: In this paper , the authors investigated the nanoscale stress-relaxation in hydrated lysozyme proteins stimulated and probed by X-ray Photon Correlation Spectroscopy (XPCS) and found that the relaxation time constants exhibit Arrhenius temperature dependence upon cooling with a minimum in the Kohlrausch-Williams-Watts exponent at 227 K.
Journal ArticleDOI

Effects of temperature and ionic strength on the microscopic structure and dynamics of egg white gels.

TL;DR: In this article , the authors investigated the thermal gelation of egg white proteins at different temperatures with varying salt concentrations using x-ray photon correlation spectroscopy in the geometry of ultra-small angle xray scattering, and the resulting gel network shows a fractal dimension δ, ranging from 1.5 to 2.2.
References
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Journal ArticleDOI

Free Energy of a Nonuniform System. I. Interfacial Free Energy

TL;DR: In this article, it was shown that the thickness of the interface increases with increasing temperature and becomes infinite at the critical temperature Tc, and that at a temperature T just below Tc the interfacial free energy σ is proportional to (T c −T) 3 2.
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Liquid phase condensation in cell physiology and disease.

TL;DR: The findings together suggest that several membrane-less organelles have been shown to exhibit a concentration threshold for assembly, a hallmark of phase separation, and represent liquid-phase condensates, which form via a biologically regulated (liquid-liquid) phase separation process.
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Free Energy of a Nonuniform System. III. Nucleation in a Two‐Component Incompressible Fluid

TL;DR: In this article, the saddle point in the expression derived in Paper I (see reference 8) for the free energy of a nonuniform system was used to derive the properties of a critical nucleus in a two-component metastable fluid.
Journal ArticleDOI

Protein Phase Separation: A New Phase in Cell Biology.

TL;DR: A combination of techniques from cell biology, biophysics, physical chemistry, structural biology, and bioinformatics are starting to help establish the molecular principles of an emerging field, thus paving the way for exciting discoveries, including novel therapeutic approaches for the treatment of age-related disorders.
Journal ArticleDOI

Brownian motion in spinodal decomposition

TL;DR: In this paper, the influence of Brownian motion on the rate of change of the diffuse intensity is characterized by a thermal driving force proportional to k B T where k B is Boltzmann's constant and T is the temperature.
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