scispace - formally typeset
Open AccessJournal ArticleDOI

Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity.

Reads0
Chats0
TLDR
The rapid escape of CO from the heme pocket compared with the rate of rebinding observed for both R and T quaternARY states shows that the quaternary structure controls the overall dissociation rate by changing the rate at which the Fe--CO bond is broken.
Abstract
A nanosecond absorption spectrometer has been used to measure the optical spectra of hemoglobin between 3 ns and 100 ms after photolysis of the CO complex. The data from a single experiment comprise a surface, defined by the time-ordered set of 50-100 spectra. Singular value decomposition is used to represent the observed spectra in terms of a minimal set of basis spectra and the time course of their amplitudes. Both CO rebinding and conformational changes are found to be multiphasic. Prior to the quaternary structural change, two relaxations are observed that are assigned to geminate recombination followed by a tertiary structural change. These relaxations are interpreted in terms of a kinetic model that points out their potential role in kinetic cooperativity. The rapid escape of CO from the heme pocket compared with the rate of rebinding observed for both R and T quaternary states shows that the quaternary structure controls the overall dissociation rate by changing the rate at which the Fe--CO bond is broken. A comparable description of the control of the overall association rates must await a more complete experimental description of the kinetics of the quaternary T state.

read more

Citations
More filters
Journal ArticleDOI

The energy landscapes and motions of proteins.

TL;DR: The concepts that emerge from studies of the conformational substates and the motions between them permit a quantitative discussion of one simple reaction, the binding of small ligands such as carbon monoxide to myoglobin.
Book ChapterDOI

Sickle cell hemoglobin polymerization.

TL;DR: The chapter discusses the thermodynamic and kinetic studies of solutions, and includes a description of the nonideal behavior of concentrated hemoglobin S solutions and the effects of physiologically relevant variables, especially oxygen, and the presence of non-S hemoglobins on the polymerization process.
Journal ArticleDOI

The role of solvent viscosity in the dynamics of protein conformational changes

TL;DR: The theory and experiment suggest that the dominant factor in markedly reducing the rate of conformational changes in myoglobin at low temperatures is the very high viscosity of the glycerol-water solvent.
Journal ArticleDOI

Photophysics and reactivity of heme proteins: a femtosecond absorption study of hemoglobin, myoglobin, and protoheme

TL;DR: In this time domain the importance of steric features of the protein are less important than the nature of the ligand itself in the geminate recombination process as well as in the relative amounts of the two heme excited states created.
Related Papers (5)