C
Chunming Xu
Researcher at Northeast Normal University
Publications - 62
Citations - 2865
Chunming Xu is an academic researcher from Northeast Normal University. The author has contributed to research in topics: Gene & DNA methylation. The author has an hindex of 20, co-authored 42 publications receiving 2227 citations. Previous affiliations of Chunming Xu include University of Georgia & Iowa State University.
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Journal ArticleDOI
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
Andrew H. Paterson,Jonathan F. Wendel,Heidrun Gundlach,Hui Guo,Jerry Jenkins,Dianchuan Jin,Danny J. Llewellyn,Kurtis C. Showmaker,Shengqiang Shu,Joshua A. Udall,Mi-Jeong Yoo,Robert L. Byers,Wei Chen,Adi Doron-Faigenboim,Mary V. Duke,Lei Gong,Jane Grimwood,Corrinne E. Grover,Kara Grupp,Guanjing Hu,Tae-Ho Lee,Jingping Li,Lifeng Lin,Tao Liu,Barry S. Marler,Justin T. Page,Alison W. Roberts,Elisson Romanel,William S. Sanders,Emmanuel Szadkowski,Xu Tan,Haibao Tang,Haibao Tang,Chunming Xu,Chunming Xu,Jinpeng Wang,Zining Wang,Dong Zhang,Lan Zhang,Hamid Ashrafi,Frank Bedon,John E. Bowers,Curt L. Brubaker,Curt L. Brubaker,Peng W. Chee,Sayan Das,Alan R. Gingle,Candace H. Haigler,David B. Harker,Lucia Vieira Hoffmann,Ran Hovav,Don C. Jones,Cornelia Lemke,Shahid Mansoor,Shahid Mansoor,Mehboob-ur Rahman,Lisa N. Rainville,Aditi Rambani,Umesh K. Reddy,Junkang Rong,Yehoshua Saranga,Brian E. Scheffler,Jodi A. Scheffler,David M. Stelly,Barbara A. Triplett,Allen Van Deynze,Maite F S Vaslin,V. N. Waghmare,Sally A. Walford,Robert J. Wright,Essam A. Zaki,Tianzhen Zhang,Elizabeth S. Dennis,Klaus F. X. Mayer,Daniel G. Peterson,Daniel S. Rokhsar,Xiyin Wang,Jeremy Schmutz +77 more
TL;DR: It is shown that an abrupt five- to sixfold ploidy increase approximately 60 million years (Myr) ago, and allopolyploidy reuniting divergent Gossypium genomes approximately 1–2 Myr ago, conferred about 30–36-fold duplication of ancestral angiosperm genes in elite cottons, genetic complexity equalled only by Brassica among sequenced angiosperms.
Journal ArticleDOI
Machine learning and complex biological data
TL;DR: This paper presents a meta-modelling framework that automates the very labor-intensive and therefore time-heavy and expensive process of manually cataloging and cataloging biological data as well as machine learning models.
Journal ArticleDOI
Transgenerational inheritance of modified DNA methylation patterns and enhanced tolerance induced by heavy metal stress in rice (Oryza sativa L.).
Xiufang Ou,Yunhong Zhang,Chunming Xu,Xiuyun Lin,Qi Zang,Tingting Zhuang,Lili Jiang,Diter von Wettstein,Bao Liu +8 more
TL;DR: It is suggested that environmental induction of heritable modifications in DNA methylation provides a plausible molecular underpinning for the still contentious paradigm of inheritance of acquired traits originally put forward by Jean-Baptiste Lamarck more than 200 years ago.
Journal ArticleDOI
Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat.
Huakun Zhang,Yao Bian,Xiaowan Gou,Bo Zhu,Bo Zhu,Chunming Xu,Bao Qi,Ning Li,Sachin Rustgi,Hao Zhou,Fangpu Han,Jiming Jiang,Diter von Wettstein,Bao Liu +13 more
TL;DR: An in-depth investigation on transgenerational chromosomal variation in resynthesized allohexaploid wheats that are identical in genome constitution to common wheat finds that whole-chromosome aneuploidy occurred ubiquitously in early generations of wheat allo hexaploids although at highly variable frequencies (20–100%).
Journal ArticleDOI
Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality
Lanjuan Hu,Ning Li,Chunming Xu,Silin Zhong,Silin Zhong,Xiuyun Lin,Jingjing Yang,Tianqi Zhou,Anzhi Yuliang,Ying Wu,Yun-Ru Chen,Xiaofeng Cao,Assaf Zemach,Sachin Rustgi,Diter von Wettstein,Bao Liu +15 more
TL;DR: This study characterizes global effects of null mutation of a MET1 gene in rice, a model plant for monocotyledons, through methylome, transcriptome, and small RNAome analyses, and characterized a null mutant of OsMet1-2, the major CG methylase in rice.