H
Hanchuan Peng
Researcher at Southeast University
Publications - 179
Citations - 30111
Hanchuan Peng is an academic researcher from Southeast University. The author has contributed to research in topics: Tracing & Image segmentation. The author has an hindex of 44, co-authored 164 publications receiving 25598 citations. Previous affiliations of Hanchuan Peng include Howard Hughes Medical Institute & Janelia Farm Research Campus.
Papers
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Journal ArticleDOI
Smart imaging to empower brain-wide neuroscience at single-cell levels
Shu-qin Guo,Jie Xue,Jian Liu,Xiangqiao Ye,Yichen Guo,Di Liu,Xuan Zhao,Feng Xiong,Xiaofeng Han,Hanchuan Peng +9 more
TL;DR: In this paper , the authors review the important computational techniques that can support smart systems in brain-wide imaging at single-cell resolution, which can automate, speed up, optimize and upgrade the imaging systems with AI and computational strategies.
Posted ContentDOI
High-throughput confocal airy beam oblique light-sheet tomography of brain-wide imaging at single-cell resolution
Xiaoli Qi,Rodrigo Muñoz-Castañeda,Arun Narasimhan,Liya Ding,Corey Elowsky,R. Michelle Drewes,Jianjun Sun,Judith Mizrachi,Hanchuan Peng,Zhuhao Wu,Pavel Osten +10 more
TL;DR: In this article , the confocal Airy beam was introduced into oblique light-sheet tomography (OLST) for high-throughput brain mapping, which enabled the high throughput of brain-wide imaging of long-distance axon projection for the entire mouse brain at a resolution of 0.26 μm × 0.6 μm.
Proceedings ArticleDOI
A HPC infrastructure for processing and visualizing neuro-anatomical images obtained by Confocal Light Sheet Microscopy
Alessandro Bria,Giulio Iannello,Paolo Soda,Hanchuan Peng,Giovanni Erbacci,Giuseppe Fiameni,Giacomo Mariani,Roberto Mucci,Marco Rorro,Francesco S. Pavone,Ludovico Silvestri,Paolo Frasconi,Roberto Cortini +12 more
TL;DR: In this paper, a HPC infrastructure for the management and the processing of neuro-anatomical images is presented, introducing the effort made to optimize and integrate specific applications in order to fully exploit the available resources.
Posted ContentDOI
Neuronal Connectivity as a Determinant of Cell Types and Subtypes
Lijuan Liu,Zhixi Yun,Linus Manubens-Gil,Hanbo Chen,Feng Xiong,Hong-Wei Dong,Hongkui Zeng,Michael Hawrylycz,Giorgio A. Ascoli,Hanchuan Peng +9 more
TL;DR: In this paper , the authors defined neuron connectivity types and subtypes for neurons in 31 brain regions and found that neuronal subtypes defined by connectivity in the same regions may share statistically higher correlation in their dendritic and axonal features than neurons having contrary connectivity patterns.
Journal ArticleDOI
A guide to the BRAIN Initiative Cell Census Network data ecosystem
Michael Hawrylycz,Maryann E. Martone,Giorgio A. Ascoli,Jan G. Bjaalie,Hong-Wei Dong,Sulagna Ghosh,Jesse Gillis,Ronna Hertzano,David R. Haynor,Patrick R. Hof,Yongsoo Kim,Ed S. Lein,Yufeng Liu,Jeremy A. Miller,Partha P. Mitra,Eran A. Mukamel,Lydia Ng,David Osumi-Sutherland,Hanchuan Peng,Patrick Ray,Raymond Sanchez,Aviv Regev,Alexander J. Ropelewski,Richard H. Scheuermann,Shawn Zheng Kai Tan,Carol L. Thompson,Timothy L. Tickle,Hagen Tilgner,Merina Varghese,Brock A. Wester,Owen White,Hongkui Zeng,Brian D. Aevermann,David Allemang,Seth A. Ament,Thomas L. Athey,Cody Baker,Katherine Baker,Pamela M. Baker,Anita Bandrowski,Prajal Bishwakarma,Ambrose James Carr,Min Chen,Roni Choudhury,Jonah Cool,Heather Huot Creasy,Florence D. D'Orazi,Kylee Degatano,Benjamin Dichter,Songlin Ding,Tim A. Dolbeare,Joseph R. Ecker,Rongxin Fang,Jean-Christophe Fillion-Robin,Tim P. Fliss,James Gee,Thomas R. Gillespie,Nathan W. Gouwens,Guo-Qiang Zhang,Yaroslav O. Halchenko,Nomi L. Harris,Brian R. Herb,Houri Hintiryan,Greg Hood,Sam Horvath,Bing-Xing Huo,Dorota Jarecka,Shengdian Jiang,Farzaneh Khajouei,Elizabeth A Kiernan,Huseyin Kir,Lauren Kruse,Changkyu Lee,Boudewijn P. F. Lelieveldt,Yang Eric Li,Huan Liu,Lijuan Liu,Anup Markuhar,James Mathews,Kaylee L. Mathews,Chris Mezias,Michael I Miller,Tyler Mollenkopf,Shoaib Mufti,Christopher J. Mungall,Joshua Orvis,Maja Puchades,Lei Qu,Joseph P. Receveur,Bing Ren,Nathan Sjoquist,Brian Staats,Daniel Tward,Cindy T. J. van Velthoven,Quanxin Wang,Fangming Xie,Hua Xu,Zizhen Yao,Zhixi Yun,Yu Zhang,W. Jim Zheng,Brian Zingg +101 more
TL;DR: The BRAIN Initiative Cell Census Network (BICCN) is an integrated network of data-generating centers, data archives, and data standards developers, with the goal of systematic multimodal brain cell type profiling and characterization as discussed by the authors .