M
Marc Hanauer
Researcher at French Institute of Health and Medical Research
Publications - 12
Citations - 1124
Marc Hanauer is an academic researcher from French Institute of Health and Medical Research. The author has contributed to research in topics: Medicine & Ontology (information science). The author has an hindex of 4, co-authored 9 publications receiving 503 citations.
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Journal ArticleDOI
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
Sebastian Köhler,Leigh C. Carmody,Nicole Vasilevsky,Julius O.B. Jacobsen,Daniel Danis,Jean-Philippe F. Gourdine,Michael A. Gargano,Nomi L. Harris,Nicolas Matentzoglu,Julie A. McMurry,David Osumi-Sutherland,Valentina Cipriani,James P. Balhoff,Tom Conlin,Hannah Blau,Gareth Baynam,Richard Palmer,Dylan Gratian,Hugh Dawkins,Michael M. Segal,Anna Jansen,Ahmed Muaz,Willie H. Chang,Jenna R.E. Bergerson,Stanley J. F. Laulederkind,Zafer Yüksel,Sergi Beltran,Alexandra F. Freeman,Panagiotis I. Sergouniotis,Daniel Durkin,Andrea L. Storm,Marc Hanauer,Michael Brudno,Susan M. Bello,Murat Sincan,Kayli Rageth,Matthew T. Wheeler,Renske Oegema,Halima Lourghi,Maria G. Della Rocca,Rachel Thompson,Francisco Castellanos,James R. Priest,Charlotte Cunningham-Rundles,Ayushi Hegde,Ruth C. Lovering,Catherine Hajek,Annie Olry,Luigi D. Notarangelo,Morgan Similuk,Xingmin Aaron Zhang,David Gómez-Andrés,Hanns Lochmüller,Hélène Dollfus,Sergio Rosenzweig,Shruti Marwaha,Ana Rath,Kathleen E. Sullivan,Cynthia L. Smith,Joshua D. Milner,Dorothée Leroux,Cornelius F. Boerkoel,Amy D. Klion,Melody C. Carter,Tudor Groza,Damian Smedley,Melissa A. Haendel,Melissa A. Haendel,Christopher J. Mungall,Peter N. Robinson +69 more
TL;DR: The HPO’s interoperability with other ontologies has enabled it to be used to improve diagnostic accuracy by incorporating model organism data and plays a key role in the popular Exomiser tool, which identifies potential disease-causing variants from whole-exome or whole-genome sequencing data.
Journal ArticleDOI
The Human Phenotype Ontology in 2021
Sebastian Köhler,Michael A. Gargano,Nicolas Matentzoglu,Leigh C. Carmody,David Lewis-Smith,David Lewis-Smith,Nicole Vasilevsky,Daniel Danis,Daniel Danis,Ganna Balagura,Gareth Baynam,Gareth Baynam,Amy Brower,Tiffany J. Callahan,Christopher G. Chute,Johanna L. Est,Peter D. Galer,Shiva Ganesan,Matthias Griese,Matthias Haimel,Julia Pazmandi,Julia Pazmandi,Marc Hanauer,Nomi L. Harris,Michael Hartnett,Maximilian Hastreiter,Fabian Hauck,Yongqun He,Tim Jeske,Hugh Kearney,Gerhard Kindle,Christoph Klein,Katrin Knoflach,Roland Krause,David Lagorce,Julie A. McMurry,Jillian A. Miller,Monica Munoz-Torres,Rebecca L. Peters,Christina K Rapp,Ana Rath,Shahmir A. Rind,Avi Z. Rosenberg,Michael M. Segal,Markus G. Seidel,Damian Smedley,Tomer Talmy,Yarlalu Thomas,Samuel A. Wiafe,Julie Xian,Zafer Yüksel,Ingo Helbig,Ingo Helbig,Christopher J. Mungall,Melissa A. Haendel,Melissa A. Haendel,Peter N. Robinson +56 more
TL;DR: Recent major extensions of the Human Phenotype Ontology for neurology, nephrology, immunology, pulmonology, newborn screening, and other areas are presented and new efforts to harmonize computational definitions of phenotypic abnormalities across the HPO and multiple phenotype ontologies used for animal models of disease are presented.
Journal ArticleDOI
Harmonising phenomics information for a better interoperability in the rare disease field
Sylvie Maiella,Annie Olry,Marc Hanauer,Valérie Lanneau,Halima Lourghi,Bruno Donadille,Charlotte Rodwell,Sebastian Köhler,Dominik Seelow,Simon Jupp,Helen Parkinson,Tudor Groza,Michael Brudno,Peter N. Robinson,Ana Rath +14 more
TL;DR: The HIPBI-RD ecosystem will contribute to the interpretation of variants identified through exome and full genome sequencing by harmonising the way phenotypic information is collected, thus improving diagnostics and delineation of RD.
Book ChapterDOI
Improved Diagnosis and Care for Rare Diseases through Implementation of Precision Public Health Framework.
Gareth Baynam,Faye L. Bowman,Karla J. Lister,Caroline E. Walker,Nicholas Pachter,Nicholas Pachter,Jack Goldblatt,Jack Goldblatt,Kym M. Boycott,William A. Gahl,Kenjiro Kosaki,Takeya Adachi,Ken Ishii,Trinity Mahede,Fiona Haslam McKenzie,Fiona Haslam McKenzie,Sharron Townshend,Jennie Slee,Cathy Kiraly-Borri,Anand Vasudevan,Anne Hawkins,Stephanie Broley,Lyn Schofield,Hedwig Verhoef,Hedwig Verhoef,Tudor Groza,Tudor Groza,Andreas Zankl,Peter N. Robinson,Melissa A. Haendel,Michael Brudno,John S. Mattick,John S. Mattick,Marcel E. Dinger,Marcel E. Dinger,Tony Roscioli,Tony Roscioli,Mark J. Cowley,Mark J. Cowley,Annie Olry,Marc Hanauer,Fowzan S. Alkuraya,Domenica Taruscio,Manuel Posada de la Paz,Hanns Lochmüller,Kate Bushby,Rachel Thompson,Victoria Hedley,Paul Lasko,Kym Mina,John Beilby,Cynthia J. Tifft,Mark M. Davis,Nigel G. Laing,Daria Julkowska,Yann Le Cam,Sharon F. Terry,Petra Kaufmann,Iiro Eerola,Irene Norstedt,Ana Rath,Makoto Suematsu,Stephen C. Groft,Christopher P. Austin,Ruxandra Draghia-Akli,Tarun Weeramanthri,Tarun Weeramanthri,Caron Molster,Hugh Dawkins +68 more
TL;DR: The conclusion is that genomic public health is informed by the individual and family needs, and the population health imperatives of an early and accurate diagnosis; which is the portal to best practice care.
Posted ContentDOI
Mondo: Unifying diseases for the world, by the world
Nicole Vasilevsky,Nicolas Matentzoglu,Sabrina Toro,Joshua E. Flack,H. Hegde,Deepak Unni,Gioconda Alyea,Joanna S. Amberger,Larry R. Babb,James P. Balhoff,T. I. Bingaman,Gully A. P. C. Burns,Tiffany J. Callahan,Leigh C. Carmody,L. Chan,Gue Su Chang,Michel Dumontier,L. Failla,Michael J. Flowers,H. A. Garrett,Dylan Gration,Tudor Groza,Marc Hanauer,Nomi L. Harris,Ingo Helbig,Jason A. Hilton,Daniel Himmelstein,C. Hoyt,Megan S. Kane,Sven Kohler,David Lagorce,Martin Larralde,Antonia Lock,I. Lopez Santiago,Donna Maglott,Adriana J. Malheiro,Birgit H M Meldal,Julie A. McMurry,Mnuel Muñoz-Torres,Tristan Nelson,David Ochoa,Opre,Ralf Stephan +42 more
TL;DR: The Mondo Disease Ontology is an open, community-driven ontology that integrates key medical and biomedical terminologies, supporting disease data integration to improve diagnosis, treatment, and translational research.