M
Marco A. Marra
Researcher at University of British Columbia
Publications - 657
Citations - 215376
Marco A. Marra is an academic researcher from University of British Columbia. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 153, co-authored 620 publications receiving 184684 citations. Previous affiliations of Marco A. Marra include BC Cancer Agency & University of Washington.
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Journal ArticleDOI
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins,Joseph W. Carlson,Kenneth H. Wan,Soo Park,Ivonne Mendez,Samuel E. Galle,Benjamin W. Booth,Barret D. Pfeiffer,Reed A. George,Robert Svirskas,Martin Krzywinski,Jacqueline E. Schein,Maria Carmela Accardo,Elisabetta Damia,Giovanni Messina,Maria Mendez-Lago,Beatriz de Pablos,Olga V. Demakova,Evgeniya N. Andreyeva,Lidiya V. Boldyreva,Marco A. Marra,A. Bernardo Carvalho,Patrizio Dimitri,Alfredo Villasante,Igor F. Zhimulev,Igor F. Zhimulev,Gerald M. Rubin,Gary H. Karpen,Gary H. Karpen,Susan E. Celniker +29 more
TL;DR: An improved reference sequence of the single-copy and middle-repetitive regions of the genome is reported, produced using cytogenetic mapping to mitotic and polytene chromosomes, clone-based finishing and BAC fingerprint verification, ordering of scaffolds by alignment to cDNA sequences, incorporation of other map and sequence data, and validation by whole-genome optical restriction mapping.
Journal ArticleDOI
SKPs Derive from Hair Follicle Precursors and Exhibit Properties of Adult Dermal Stem Cells
Jeff Biernaskie,Maryline Paris,Olena Morozova,B. Matthew Fagan,Marco A. Marra,Larysa H. Pevny,Freda D. Miller +6 more
TL;DR: It is shown that skin-derived precursors (SKPs) derive from Sox2(+) hair follicle dermal cells and that these two cell populations are similar with regard to their transcriptome and functional properties.
Journal ArticleDOI
Next-generation tag sequencing for cancer gene expression profiling
A. Sorana Morrissy,Ryan D. Morin,Allen Delaney,Thomas Zeng,Helen McDonald,Steven J.M. Jones,Yongjun Zhao,Martin Hirst,Marco A. Marra +8 more
TL;DR: Overall, Tag-seq is sensitive to rare transcripts, has less sequence composition bias relative to LongSAGE, and allows differential expression analysis for a greater range of transcripts, including transcripts encoding important regulatory molecules.
Journal ArticleDOI
A physical map of the mouse genome.
Simon G. Gregory,Mandeep Sekhon,Jacqueline E. Schein,Shaying Zhao,Kazutoyo Osoegawa,Carol Scott,R Evans,Paul W. Burridge,Tony Cox,Christopher A Fox,Richard D. Hutton,Ian R Mullenger,Kimbly J Phillips,James Smith,Jim Stalker,Glen Threadgold,Ewan Birney,Kristine M. Wylie,Asif T. Chinwalla,John W. Wallis,LaDeana W. Hillier,Jason Carter,Tony Gaige,Sara Jaeger,Colin Kremitzki,Dan Layman,Jason Maas,Rebecca McGrane,Kelly Mead,Rebecca S. Walker,Steven J.M. Jones,Michael Smith,Jennifer Asano,Ian Bosdet,Susanna Chan,Suganthi Chittaranjan,Readman Chiu,Chris Fjell,Dan Fuhrmann,Noreen Girn,Catharine Gray,Ran Guin,Letticia Hsiao,Martin Krzywinski,Reta Kutsche,Soo Sen Lee,Carrie Mathewson,Candice McLeavy,Steve Messervier,Steven R. Ness,Pawan Pandoh,Anna-Liisa Prabhu,Parvaneh Saeedi,Duane E Smailus,Lorraine Spence,Jeffrey L Stott,Sheryl Taylor,Wesley Terpstra,Miranda Tsai,Jill Vardy,Natasja Wye,George S. Yang,Sofiya Shatsman,Bola Ayodeji,Keita Geer,Getahun Tsegaye,Alla Shvartsbeyn,Elizabeth Gebregeorgis,Margaret Krol,Daniel A. Russell,Larry Overton,Joel A. Malek,Michael C. Holmes,Michael Heaney,Jyoti Shetty,Tamara Feldblyum,William C. Nierman,Joseph J. Catanese,Tim Hubbard,Robert H. Waterston,Jane Rogers,Pieter J. de Jong,Claire M. Fraser,Marco A. Marra,John Douglas Mcpherson,David R. Bentley +85 more
TL;DR: A physical map of the mouse genome that contains 296 contigs of overlapping bacterial clones and 16,992 unique markers is constructed, enabling identification of a mouse clone that corresponds to almost any position in the human genome.
Journal ArticleDOI
Transcriptome analysis of the normal human mammary cell commitment and differentiation process.
Afshin Raouf,Yun Zhao,Karen To,John Stingl,Allen Delaney,Mary Barbara,Norman N. Iscove,Steven J.M. Jones,Steven McKinney,Joanne T. Emerman,Samuel Aparicio,Marco A. Marra,Marco A. Marra,Connie J. Eaves,Connie J. Eaves +14 more
TL;DR: Functional studies showed NOTCH3 signaling to be critical for this differentiation event to occur in vitro and provide an initial foundation for future delineation of mechanisms that perturb primitive human mammary cell growth and differentiation.