D
Daniel A. Russell
Researcher at University of Pittsburgh
Publications - 95
Citations - 5018
Daniel A. Russell is an academic researcher from University of Pittsburgh. The author has contributed to research in topics: Genome & Mycobacteriophages. The author has an hindex of 24, co-authored 89 publications receiving 3841 citations. Previous affiliations of Daniel A. Russell include J. Craig Venter Institute.
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Journal ArticleDOI
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
C. Robin Buell,Vinita Joardar,Magdalen Lindeberg,Jeremy D. Selengut,Ian T. Paulsen,Michelle L. Gwinn,Robert J. Dodson,Robert T. DeBoy,A. Scott Durkin,James F. Kolonay,Ramana Madupu,Sean C. Daugherty,Lauren M. Brinkac,Maureen J. Beanan,Daniel H. Haft,William C. Nelson,Tanja M. Davidsen,Nikhat Zafar,Liwei Zhou,Jia Liu,Qiaoping Yuan,Hoda Khouri,Nadia Fedorova,Bao Tran,Daniel A. Russell,Kristi Berry,Teresa Utterback,Susan Van Aken,Tamara Feldblyum,Mark D'Ascenzo,Wen Ling Deng,Adela R. Ramos,James R. Alfano,Samuel W. Cartinhour,Arun K. Chatterjee,Terrence P. Delaney,Sondra G. Lazarowitz,Gregory B. Martin,David J. Schneider,Xiaoyan Tang,Carol L. Bender,Owen White,Claire M. Fraser,Alan Collmer +43 more
TL;DR: The complete genome sequence of the model bacterial pathogen Pseudomonas syringae pathovar tomato DC3000 (DC3000), which is pathogenic on tomato and Arabidopsis thaliana, is reported and 1,159 genes unique to DC3000 are revealed, of which 811 lack a known function.
Journal ArticleDOI
Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus
Rebekah M. Dedrick,Carlos A Guerrero-Bustamante,Rebecca A. Garlena,Daniel A. Russell,Katrina Ford,Kathryn A. Harris,Kimberly Gilmour,James Soothill,Deborah Jacobs-Sera,Robert T. Schooley,Graham F. Hatfull,Helen Spencer +11 more
TL;DR: Intravenous phage treatment was well tolerated and associated with objective clinical improvement, including sternal wound closure, improved liver function, and substantial resolution of infected skin nodules.
Journal ArticleDOI
A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students
Tuajuanda C. Jordan,Sandra H. Burnett,Susan Carson,Steven M. Caruso,Kari Clase,Randall J. DeJong,John J. Dennehy,Dee R. Denver,David Dunbar,Sarah C. R. Elgin,Ann M. Findley,Chris R. Gissendanner,Urszula Golebiewska,Nancy Guild,Grant A. Hartzog,Wendy H. Grillo,Gail P. Hollowell,Lee E. Hughes,Allison Johnson,Rodney A. King,Lynn O. Lewis,Wei Li,Frank Rosenzweig,Michael R. Rubin,Margaret S. Saha,James Sandoz,Christopher D. Shaffer,Barbara J. Taylor,Larissa K. Temple,Edwin Vazquez,Vassie C. Ware,Lucia P. Barker,Kevin W. Bradley,Deborah Jacobs-Sera,Welkin H. Pope,Daniel A. Russell,Steven G. Cresawn,David Lopatto,Cheryl Bailey,Graham F. Hatfull +39 more
TL;DR: A general model in which faculty and teaching assistants from diverse academic institutions are trained to teach a research course for first-year undergraduate students focused on bacteriophage discovery and genomics is developed, showing that this alliance-sourced model not only substantially advances the field of phage genomics but also stimulates students’ interest in science, positively influences academic achievement, and enhances persistence inScience, technology, engineering, and mathematics (STEM) disciplines.
Journal ArticleDOI
A physical map of the mouse genome.
Simon G. Gregory,Mandeep Sekhon,Jacqueline E. Schein,Shaying Zhao,Kazutoyo Osoegawa,Carol Scott,R Evans,Paul W. Burridge,Tony Cox,Christopher A Fox,Richard D. Hutton,Ian R Mullenger,Kimbly J Phillips,James Smith,Jim Stalker,Glen Threadgold,Ewan Birney,Kristine M. Wylie,Asif T. Chinwalla,John W. Wallis,LaDeana W. Hillier,Jason Carter,Tony Gaige,Sara Jaeger,Colin Kremitzki,Dan Layman,Jason Maas,Rebecca McGrane,Kelly Mead,Rebecca S. Walker,Steven J.M. Jones,Michael Smith,Jennifer Asano,Ian Bosdet,Susanna Chan,Suganthi Chittaranjan,Readman Chiu,Chris Fjell,Dan Fuhrmann,Noreen Girn,Catharine Gray,Ran Guin,Letticia Hsiao,Martin Krzywinski,Reta Kutsche,Soo Sen Lee,Carrie Mathewson,Candice McLeavy,Steve Messervier,Steven R. Ness,Pawan Pandoh,Anna-Liisa Prabhu,Parvaneh Saeedi,Duane E Smailus,Lorraine Spence,Jeffrey L Stott,Sheryl Taylor,Wesley Terpstra,Miranda Tsai,Jill Vardy,Natasja Wye,George S. Yang,Sofiya Shatsman,Bola Ayodeji,Keita Geer,Getahun Tsegaye,Alla Shvartsbeyn,Elizabeth Gebregeorgis,Margaret Krol,Daniel A. Russell,Larry Overton,Joel A. Malek,Michael C. Holmes,Michael Heaney,Jyoti Shetty,Tamara Feldblyum,William C. Nierman,Joseph J. Catanese,Tim Hubbard,Robert H. Waterston,Jane Rogers,Pieter J. de Jong,Claire M. Fraser,Marco A. Marra,John Douglas Mcpherson,David R. Bentley +85 more
TL;DR: A physical map of the mouse genome that contains 296 contigs of overlapping bacterial clones and 16,992 unique markers is constructed, enabling identification of a mouse clone that corresponds to almost any position in the human genome.
Journal ArticleDOI
Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size.
Graham F. Hatfull,Deborah Jacobs-Sera,Jeffrey G. Lawrence,Welkin H. Pope,Daniel A. Russell,Ching-Chung Ko,Rebecca J. Weber,Manisha C. Patel,Katherine L. Germane,Robert H. Edgar,Natasha N. Hoyte,Charles A. Bowman,Anthony T. Tantoco,Elizabeth C. Paladin,Marlana S. Myers,Alexis L. Smith,Molly S. Grace,Thuy T. Pham,Matthew B. O'Brien,Amy M. Vogelsberger,Andrew J. Hryckowian,Jessica L. Wynalek,Helen Donis-Keller,Matt W. Bogel,Craig L. Peebles,Steven G. Cresawn,Roger W. Hendrix +26 more
TL;DR: Expansion of a collection of sequenced phage genomes to a total of 60-all infecting a common bacterial host-provides further insight into their diversity and evolution.