T
Taku Tokuyasu
Researcher at University of California, San Francisco
Publications - 19
Citations - 2916
Taku Tokuyasu is an academic researcher from University of California, San Francisco. The author has contributed to research in topics: Comparative genomic hybridization & Cancer. The author has an hindex of 13, co-authored 19 publications receiving 2769 citations.
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Journal ArticleDOI
Genomic and transcriptional aberrations linked to breast cancer pathophysiologies.
Koei Chin,Sandy DeVries,Jane Fridlyand,Paul T. Spellman,Ritu Roydasgupta,Wen Lin Kuo,Wen Lin Kuo,Anna Lapuk,Anna Lapuk,Richard M. Neve,Richard M. Neve,Zuwei Qian,Thomas B. Ryder,Fanqing Chen,Heidi S. Feiler,Heidi S. Feiler,Taku Tokuyasu,Chris Kingsley,Shanaz H. Dairkee,Zhenhang Meng,Karen Chew,Daniel Pinkel,Ajay N. Jain,Britt-Marie Ljung,Laura J. Esserman,Donna G. Albertson,Frederic M. Waldman,Joe W. Gray,Joe W. Gray +28 more
TL;DR: It is shown that the recurrent CNAs differ between tumor subtypes defined by expression pattern and that stratification of patients according to outcome can be improved by measuring both expression and copy number, especially high-level amplification.
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Fully Automatic Quantification of Microarray Image Data
Ajay N. Jain,Taku Tokuyasu,Antoine M. Snijders,Richard Segraves,Donna G. Albertson,Daniel Pinkel +5 more
TL;DR: A fully automatic system for microarray image quantification that automatically locates both subarray grids and individual spots, requiring no user identification of any image coordinates, and yields more accurate estimates of ratios than systems assuming spot circularity.
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Breast tumor copy number aberration phenotypes and genomic instability
Jane Fridlyand,Antoine M. Snijders,Bauke Ylstra,Bauke Ylstra,Hua Li,Adam B. Olshen,Adam B. Olshen,Richard Segraves,Shanaz Dairkee,Shanaz Dairkee,Taku Tokuyasu,Britt-Marie Ljung,Ajay N. Jain,Jane McLennan,John L. Ziegler,Koei Chin,Sandy DeVries,Heidi S. Feiler,Heidi S. Feiler,Joe W. Gray,Joe W. Gray,Frederic M. Waldman,Daniel Pinkel,Donna G. Albertson +23 more
TL;DR: In this article, the authors applied array comparative genomic hybridization (CGH) to the analysis of breast tumors and found that shorter telomeres and altered telomere related gene expression are associated with amplification.
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Differential Requirements for eIF4E Dose in Normal Development and Cancer
Morgan L. Truitt,Crystal S. Conn,Zhen Shi,Xiaming Pang,Taku Tokuyasu,Alison Coady,Youngho Seo,Maria Barna,Davide Ruggero +8 more
TL;DR: It is demonstrated that the dose of eIF4E is essential for translating mRNAs that regulate reactive oxygen species, fueling transformation and cancer cell survival in vivo, and also for driving a translational program supporting tumorigenesis.
Journal ArticleDOI
Gene Expression Profile Identifies Tyrosine Kinase c-Met as a Targetable Mediator of Antiangiogenic Therapy Resistance
Arman Jahangiri,Michael De Lay,Liane M. Miller,W. Shawn Carbonell,Yu-Long Hu,Kan Lu,Maxwell W. Tom,Jesse Paquette,Taku Tokuyasu,Sean Tsao,Roxanne Marshall,Arie Perry,Kirsten Bjorgan,Myriam M. Chaumeil,Sabrina M. Ronen,Gabriele Bergers,Manish K. Aghi +16 more
TL;DR: Findings support the role of c-Met in survival in hypoxia and invasion, features associated with antiangiogenic therapy resistance, and growth and therapeutic resistance of xenografts resistant to antiangIogenic therapy.