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Open AccessJournal ArticleDOI

An algal photoenzyme converts fatty acids to hydrocarbons

TLDR
It is shown that the microalga Chlorella variabilis NC64A harbors a photoenzyme that acts in lipid metabolism that may be useful in light-driven, bio-based production of hydrocarbons, which is named fatty acid photodecarboxylase.
Abstract
Although many organisms capture or respond to sunlight, few enzymes are known to be driven by light. Among these are DNA photolyases and the photosynthetic reaction centers. Here, we show that the microalga Chlorella variabilis NC64A harbors a photoenzyme that acts in lipid metabolism. This enzyme belongs to an algae-specific clade of the glucose-methanol-choline oxidoreductase family and catalyzes the decarboxylation of free fatty acids to n-alkanes or -alkenes in response to blue light. Crystal structure of the protein reveals a fatty acid–binding site in a hydrophobic tunnel leading to the light-capturing flavin adenine dinucleotide (FAD) cofactor. The decarboxylation is initiated through electron abstraction from the fatty acid by the photoexcited FAD with a quantum yield >80%. This photoenzyme, which we name fatty acid photodecarboxylase, may be useful in light-driven, bio-based production of hydrocarbons.

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Engineering new catalytic activities in enzymes

TL;DR: This Review outlines the ways that enzymes have been engineered to achieve reactivities well beyond their original functions and identifies genetically encoded catalysts that can be tuned and diversified by engineering the protein sequence.
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Opportunities and challenges for combining chemo- and biocatalysis

TL;DR: This Review focuses on efforts to combine chemo- and biocatalysts, outlining the opportunities achievable by this approach and also efforts to overcome any incompatibilities between these different systems.
Journal ArticleDOI

Photoexcitation of flavoenzymes enables a stereoselective radical cyclization

TL;DR: It is found that photoexcitation of flavin-dependent “ene”-reductases changes their catalytic function, enabling these enzymes to promote an asymmetric radical cyclization, furnished a previously unknown biocatalytic reaction.
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Photo-Biocatalysis: Biotransformations in the Presence of Light

TL;DR: An overview of the various approaches for using light in biocatalysis is given and enzymes with a light switchable moiety have been investigated to turn off/on or tune the actual reaction.
Journal ArticleDOI

Blue-Light Receptors for Optogenetics.

TL;DR: UV/blue-light-sensitive photoreceptors have particularly allowed optogenetics to transcend its initial neuroscience applications by unlocking numerous additional cellular processes and parameters for optogenetic intervention, including gene expression, DNA recombination, subcellular localization, cytoskeleton dynamics, intracellular protein stability, signal transduction cascades, apoptosis, and enzyme activity.
References
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Journal ArticleDOI

Features and development of Coot.

TL;DR: Coot is a molecular-graphics program designed to assist in the building of protein and other macromolecular models and the current state of development and available features are presented.
Journal Article

PHYLIP-Phylogeny inference package (Version 3.2)

J. Felsenstein
- 01 Jan 1989 - 
Journal ArticleDOI

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

TL;DR: A simplified scoring system is proposed that performs well for reducing CPU time and increasing the accuracy of alignments even for sequences having large insertions or extensions as well as distantly related sequences of similar length.
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