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Open AccessJournal ArticleDOI

Finding community structure in networks using the eigenvectors of matrices

Mark Newman
- 11 Sep 2006 - 
- Vol. 74, Iss: 3, pp 036104-036104
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TLDR
A modularity matrix plays a role in community detection similar to that played by the graph Laplacian in graph partitioning calculations, and a spectral measure of bipartite structure in networks and a centrality measure that identifies vertices that occupy central positions within the communities to which they belong are proposed.
Abstract
We consider the problem of detecting communities or modules in networks, groups of vertices with a higher-than-average density of edges connecting them. Previous work indicates that a robust approach to this problem is the maximization of the benefit function known as ``modularity'' over possible divisions of a network. Here we show that this maximization process can be written in terms of the eigenspectrum of a matrix we call the modularity matrix, which plays a role in community detection similar to that played by the graph Laplacian in graph partitioning calculations. This result leads us to a number of possible algorithms for detecting community structure, as well as several other results, including a spectral measure of bipartite structure in networks and a centrality measure that identifies vertices that occupy central positions within the communities to which they belong. The algorithms and measures proposed are illustrated with applications to a variety of real-world complex networks.

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Citations
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Journal ArticleDOI

Forman curvature for complex networks

TL;DR: This work adapts Forman's discretization of Ricci curvature to the case of undirected networks, both weighted and unweighted, and investigates the measure in a variety of model and real-world networks to suggest that it can be employed to gain novel insights on the organization of complex networks.
Book ChapterDOI

A Comparison of Community Detection Algorithms on Artificial Networks

TL;DR: This work uses Lancichinetti et al. model, which is able to generate networks with controlled power-law degree and community distributions, to test some community detection algorithms and uses the normalized mutual information measure to assess the quality of the results and compare the considered algorithms.
Book

Basic Phylogenetic Combinatorics

TL;DR: This book focuses on the interrelationship between the principal options for encoding phylogenetic trees: split systems, quartet systems and metrics, and highlights how each provides a unique perspective for viewing and perceiving the combinatorial structure of a phylogenetic tree.
Journal ArticleDOI

Emergence of Persistent Networks in Long-Term Intracranial EEG Recordings

TL;DR: It is suggested that a metastable, frequency-band-dependent scaffold of brain connectivity exists from which transient activity emerges and recedes, and that these structures are robust, emerging from brief time intervals regardless of cognitive state.
Journal ArticleDOI

Dynamical exploration of the repertoire of brain networks at rest is modulated by psilocybin

TL;DR: How the brain's dynamical exploration of resting-state networks is rapidly modulated by intravenous infusion of psilocybin is characterized and one of the first attempts at bridging molecular pharmacodynamics and whole-brain network dynamics is represented.
References
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Journal ArticleDOI

Collective dynamics of small-world networks

TL;DR: Simple models of networks that can be tuned through this middle ground: regular networks ‘rewired’ to introduce increasing amounts of disorder are explored, finding that these systems can be highly clustered, like regular lattices, yet have small characteristic path lengths, like random graphs.
Journal ArticleDOI

The Strength of Weak Ties

TL;DR: In this paper, it is argued that the degree of overlap of two individuals' friendship networks varies directly with the strength of their tie to one another, and the impact of this principle on diffusion of influence and information, mobility opportunity, and community organization is explored.
Journal ArticleDOI

Emergence of Scaling in Random Networks

TL;DR: A model based on these two ingredients reproduces the observed stationary scale-free distributions, which indicates that the development of large networks is governed by robust self-organizing phenomena that go beyond the particulars of the individual systems.

疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

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TL;DR: PfPMP1)与感染红细胞、树突状组胞以及胎盘的单个或多个受体作用,在黏附及免疫逃避中起关键的作�ly.
Journal ArticleDOI

The Structure and Function of Complex Networks

Mark Newman
- 01 Jan 2003 - 
TL;DR: Developments in this field are reviewed, including such concepts as the small-world effect, degree distributions, clustering, network correlations, random graph models, models of network growth and preferential attachment, and dynamical processes taking place on networks.
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