scispace - formally typeset
Open AccessJournal ArticleDOI

Log-Euclidean metrics for fast and simple calculus on diffusion tensors

Reads0
Chats0
TLDR
A new family of Riemannian metrics called Log‐Euclidean is proposed, based on a novel vector space structure for tensors, which can be converted into Euclidean ones once tensors have been transformed into their matrix logarithms.
Abstract
Diffusion tensor imaging (DT-MRI or DTI) is an emerging imaging modality whose importance has been growing considerably. However, the processing of this type of data (i.e., symmetric positive-definite matrices), called "tensors" here, has proved difficult in recent years. Usual Euclidean operations on matrices suffer from many defects on tensors, which have led to the use of many ad hoc methods. Recently, affine-invariant Riemannian metrics have been proposed as a rigorous and general framework in which these defects are corrected. These metrics have excellent theoretical properties and provide powerful processing tools, but also lead in practice to complex and slow algorithms. To remedy this limitation, a new family of Riemannian metrics called Log-Euclidean is proposed in this article. They also have excellent theoretical properties and yield similar results in practice, but with much simpler and faster computations. This new approach is based on a novel vector space structure for tensors. In this framework, Riemannian computations can be converted into Euclidean ones once tensors have been transformed into their matrix logarithms. Theoretical aspects are presented and the Euclidean, affine-invariant, and Log-Euclidean frameworks are compared experimentally. The comparison is carried out on interpolation and regularization tasks on synthetic and clinical 3D DTI data.

read more

Citations
More filters
Journal ArticleDOI

Dipy, a library for the analysis of diffusion MRI data

TL;DR: Dipy aims to provide transparent implementations for all the different steps of dMRI analysis with a uniform programming interface, and has implemented classical signal reconstruction techniques, such as the diffusion tensor model and deterministic fiber tractography.
Journal ArticleDOI

Diffusion Tensor Imaging and Beyond

TL;DR: This article reviews the recent advances in diffusion tensor imaging and three-dimensional reconstruction technologies for white matter tracts since 2000, including more sophisticated nontensor models to describe diffusion properties and to extract finer anatomical information from each voxel.
Journal ArticleDOI

Geometric means in a novel vector space structure on symmetric positive-definite matrices

TL;DR: This work defines the Log‐Euclidean mean from a Riemannian point of view, based on a lie group structure which is compatible with the usual algebraic properties of this matrix space and a new scalar multiplication that smoothly extends the Lie group structure into a vector space structure.
Journal ArticleDOI

Diffusion MRI fiber tractography of the brain

TL;DR: An overview of the key concepts of tractography, the technical considerations at play, and the different types of tractographic algorithm, as well as the common misconceptions and mistakes that surround them are provided.
Proceedings ArticleDOI

Kernel Methods on the Riemannian Manifold of Symmetric Positive Definite Matrices

TL;DR: To encode the geometry of the manifold in the mapping, a family of provably positive definite kernels on the Riemannian manifold of SPD matrices is introduced, derived from the Gaussian kernel, but exploit different metrics on the manifold.
References
More filters
Journal ArticleDOI

MR diffusion tensor spectroscopy and imaging.

TL;DR: Once Deff is estimated from a series of NMR pulsed-gradient, spin-echo experiments, a tissue's three orthotropic axes can be determined and the effective diffusivities along these orthotropic directions are the eigenvalues of Deff.
Journal ArticleDOI

Diffusion tensor imaging: Concepts and applications

TL;DR: The concepts behind diffusion tensor imaging are reviewed and potential applications, including fiber tracking in the brain, which, in combination with functional MRI, might open a window on the important issue of connectivity.
Journal ArticleDOI

In vivo fiber tractography using DT-MRI data

TL;DR: Fiber tract trajectories in coherently organized brain white matter pathways were computed from in vivo diffusion tensor magnetic resonance imaging (DT‐MRI) data, and the method holds promise for elucidating architectural features in other fibrous tissues and ordered media.
Journal ArticleDOI

Q‐ball imaging

TL;DR: This work has shown that it is possible to resolve intravoxel fiber crossing using mixture model decomposition of the high angular resolution diffusion imaging (HARDI) signal, but mixture modeling requires a model of the underlying diffusion process.
Journal ArticleDOI

A Riemannian Framework for Tensor Computing

TL;DR: This paper proposes to endow the tensor space with an affine-invariant Riemannian metric and demonstrates that it leads to strong theoretical properties: the cone of positive definite symmetric matrices is replaced by a regular and complete manifold without boundaries, the geodesic between two tensors and the mean of a set of tensors are uniquely defined.
Related Papers (5)