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Models of Self-Organizing Bacterial Communities and Comparisons with Experimental Observations

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TLDR
A critical anal ysis of the validity of the model based on recent observations of the swarming bacteria which show that nutrients are not limitating but distinct subpopulations growing at different rates are lik ely present is presented.
Abstract
Bacillus subtilis swarms rapidly over the surface of a synthetic medium creating remarkable hyperbranched dendritic communities. Models to reproduce such effects have been proposed under the form of parabolic Partial Differential Equations representing the dynamics of the active cells (both motile and multiplying), the passive cells (non-motile and non-growing) and nutrient concentration. We test the numerical behavior of such models and compare them to relevant experimental data together with a critical analysis of the validity of the models based on recent observations of the swarming bacteria which show that nutrients are not limitating but distinct subpopulations growing at different rates are likely present.

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Beltanelliformis konovalovi sp. nov. From the Terminal Neoproterozoic of Central Urals: Taphonomic and Ecological Implications

TL;DR: In this paper , the authors reported Beltanelliformis konovalovi sp. nov. found as a paleocommunity of organisms and studied for their morphology and spatial distribution.
Journal ArticleDOI

Modeling the role of water in Bacillus subtilis colonies.

TL;DR: It is shown that it is possible to reproduce in a fairly satisfactory way the various forms that make up the experimentally observed morphological diagram of B. subtilis.
Journal ArticleDOI

Connecting single-cell properties to collective behavior in multiple wild isolates of the Enterobacter cloacae complex.

TL;DR: This work isolated 7 wild strains of the Enterobacter cloacae complex capable of forming a high cell density swarm band and found its propagation speed can vary 2.5 fold across strains.
Journal ArticleDOI

Mechanically Driven Branching of Bacterial Colonies

TL;DR: The analytical analysis demonstrates that the front of the colony is linearly unstable for a proper choice of the parameters, and simulation of the model in the nonlinear regime confirms the development of fingers with typical wavelength controlled by the size parameters of the problem.
Dissertation

Contributions mathématiques à l'étude de modèles décrivant le mouvement de particules confinées et de micro-organismes

TL;DR: In this article, a hierarchy of model-d'equations for derivees partielles is proposed, which is based on the Schrodinger stationnaire's model of run-and-tumble.
References
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Journal ArticleDOI

Model for Chemotaxis

TL;DR: The chemotactic response of unicellular microscopic organisms is viewed as analogous to Brownian motion, and a macroscopic flux is derived which is proportional to the chemical gradient.
Book

Transport Equations in Biology

TL;DR: In this paper, the renewal equation is used to describe the structure of a population from a point of view of population balance equations, which is an asymptotic view of the population dynamics.
Journal ArticleDOI

The branching programme of mouse lung development

TL;DR: This work presents the complete three-dimensional branching pattern and lineage of the mouse bronchial tree, reconstructed from an analysis of hundreds of developmental intermediates, and proposes that each mode of branching is controlled by a genetically encoded subroutine, a series of local patterning and morphogenesis operations, which are themselvescontrolled by a more global master routine.
Journal Article

Two-dimensional Keller-Segel model: Optimal critical mass and qualitative properties of the solutions

TL;DR: The Keller-Segel system describes the collective motion of cells which are attracted by a chemical substance and are able to emit it in its simplest form it is a conservative drift-diffusion equation coupled to an elliptic equation for the chemo-attractant concentration as mentioned in this paper.
Journal ArticleDOI

Autocatalytic reactions in the isothermal, continuous stirred tank reactor: Isolas and other forms of multistability

TL;DR: In this paper, the authors consider the simple case of uniform temperatures and concentrations in the isothermal CSTR and the simplest of reaction schemes: (i) quadratic autocatalysis (A + B →2 B ); and (ii) cubic autoccatalysis ( A + 2 B →3 B ).
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