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The ground truth about metadata and community detection in networks

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TLDR
It is proved that no algorithm can uniquely solve community detection, and a general No Free Lunch theorem for community detection is proved, which implies that there can be no algorithm that is optimal for all possible community detection tasks.
Abstract
Across many scientific domains, there is a common need to automatically extract a simplified view or coarse-graining of how a complex system's components interact. This general task is called community detection in networks and is analogous to searching for clusters in independent vector data. It is common to evaluate the performance of community detection algorithms by their ability to find so-called ground truth communities. This works well in synthetic networks with planted communities because these networks' links are formed explicitly based on those known communities. However, there are no planted communities in real-world networks. Instead, it is standard practice to treat some observed discrete-valued node attributes, or metadata, as ground truth. We show that metadata are not the same as ground truth and that treating them as such induces severe theoretical and practical problems. We prove that no algorithm can uniquely solve community detection, and we prove a general No Free Lunch theorem for community detection, which implies that there can be no algorithm that is optimal for all possible community detection tasks. However, community detection remains a powerful tool and node metadata still have value, so a careful exploration of their relationship with network structure can yield insights of genuine worth. We illustrate this point by introducing two statistical techniques that can quantify the relationship between metadata and community structure for a broad class of models. We demonstrate these techniques using both synthetic and real-world networks, and for multiple types of metadata and community structures.

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Citations
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Journal ArticleDOI

Demarcating geographic regions using community detection in commuting networks with significant self-loops.

TL;DR: The authors developed a method to identify statistically significant communities in a weighted network with a high proportion of self-looping weights, and used this method to find overlapping agglomerations of U.S. counties.
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Identifying flow modules in ecological networks using Infomap

TL;DR: Infomap is a flexible tool that can identify modules in virtually any type of ecological network and is particularly useful for directed, weighted and multilayer networks, and the open‐source R package infomapecology is introduced.
Journal ArticleDOI

Dual-channel Hybrid Community Detection in Attributed Networks

TL;DR: A novel Dual-channel Hybrid Community Detection (DHCD) method that considers the dominant effects of topology and attributes separately and can simultaneously derive the community partitioning membership and corresponding semantic descriptions is presented.
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A Distributed Bagging Ensemble Methodology for Community Prediction in Social Networks

TL;DR: This article introduces a novel, distributed community detection methodology which in accordance with the community prediction concept, leverages the reduced complexity and the decreased variance of the bagging ensemble methods, to unveil the subjacent community hierarchy.
Journal ArticleDOI

Method evaluation, parameterization, and result validation in unsupervised data mining: A critical survey

TL;DR: It is argued that an objective obstacle for performing needed studies is a lack of data and survey the state of available data, pointing out certain limitations, and called for the development of a true "Data Science" that develops needed data generators and builds up the knowledge needed to effectively employ unsupervised mining techniques.
References
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Journal ArticleDOI

Community structure in social and biological networks

TL;DR: This article proposes a method for detecting communities, built around the idea of using centrality indices to find community boundaries, and tests it on computer-generated and real-world graphs whose community structure is already known and finds that the method detects this known structure with high sensitivity and reliability.
Journal ArticleDOI

Normalized cuts and image segmentation

TL;DR: This work treats image segmentation as a graph partitioning problem and proposes a novel global criterion, the normalized cut, for segmenting the graph, which measures both the total dissimilarity between the different groups as well as the total similarity within the groups.
Proceedings ArticleDOI

Normalized cuts and image segmentation

TL;DR: This work treats image segmentation as a graph partitioning problem and proposes a novel global criterion, the normalized cut, for segmenting the graph, which measures both the total dissimilarity between the different groups as well as the total similarity within the groups.
Journal ArticleDOI

Community detection in graphs

TL;DR: A thorough exposition of community structure, or clustering, is attempted, from the definition of the main elements of the problem, to the presentation of most methods developed, with a special focus on techniques designed by statistical physicists.
Journal ArticleDOI

Community detection in graphs

TL;DR: A thorough exposition of the main elements of the clustering problem can be found in this paper, with a special focus on techniques designed by statistical physicists, from the discussion of crucial issues like the significance of clustering and how methods should be tested and compared against each other, to the description of applications to real networks.
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