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Open AccessJournal ArticleDOI

The 'how' and 'where' of plant microRNAs.

Yu Yu, +2 more
- 01 Dec 2017 - 
- Vol. 216, Iss: 4, pp 1002-1017
TLDR
The current knowledge on how plant miRNAs are made and degraded, and how they repress target gene expression is summarized to raise awareness that the cell biology of miRNA holds the key to a full understanding of these enigmatic molecules.
Abstract
Contents 1002 I. 1002 II. 1007 III. 1010 IV. 1013 1013 References 1013 SUMMARY: MicroRNAs (miRNAs) are small non-coding RNAs, of typically 20-24 nt, that regulate gene expression post-transcriptionally through sequence complementarity. Since the identification of the first miRNA, lin-4, in the nematode Caenorhabditis elegans in 1993, thousands of miRNAs have been discovered in animals and plants, and their regulatory roles in numerous biological processes have been uncovered. In plants, research efforts have established the major molecular framework of miRNA biogenesis and modes of action, and are beginning to elucidate the mechanisms of miRNA degradation. Studies have implicated restricted and surprising subcellular locations in which miRNA biogenesis or activity takes place. In this article, we summarize the current knowledge on how plant miRNAs are made and degraded, and how they repress target gene expression. We discuss not only the players involved in these processes, but also the subcellular sites in which these processes are known or implicated to take place. We hope to raise awareness that the cell biology of miRNAs holds the key to a full understanding of these enigmatic molecules.

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Citations
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MicroRNAs: Target Recognition and Regulatory Functions

TL;DR: In this article, a review outlines the current understanding of miRNA target recognition in animals and discusses the widespread impact of miRNAs on both the expression and evolution of protein-coding genes.
Journal ArticleDOI

1-Aminocyclopropane-1-Carboxylic Acid Oxidase (ACO): The Enzyme That Makes the Plant Hormone Ethylene

TL;DR: The importance of ACO being a prime target for genetic engineering and precision breeding, in order to control plant ethylene production levels is highlighted, with an emphasis on the transcriptional, post-transcriptional, and post- translational control.
Journal ArticleDOI

Plant Noncoding RNAs: Hidden Players in Development and Stress Responses.

TL;DR: The current knowledge of plant small RNAs and lncRNAs is summarized, with a focus on their biogenesis, modes of action, local and systemic movement, and functions at the nexus of plant development and environmental responses.
Journal ArticleDOI

Plant microRNAs: Biogenesis, Homeostasis, and Degradation

TL;DR: The current understanding of the molecular components and mechanisms that influence miRNA biogenesis, homeostasis, and degradation in plants is summarized.
Journal ArticleDOI

Plant Extracellular Vesicles Contain Diverse Small RNA Species and Are Enriched in 10- to 17-Nucleotide "Tiny" RNAs.

TL;DR: It is found that specific miRNAs and siRNAs are preferentially loaded into plant EVs, and a previously overlooked class of “tiny RNAs” (10 to 17 nt) that are highly enriched in EVs are reported.
References
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Journal ArticleDOI

MicroRNAs: Target Recognition and Regulatory Functions

TL;DR: The current understanding of miRNA target recognition in animals is outlined and the widespread impact of miRNAs on both the expression and evolution of protein-coding genes is discussed.
Journal ArticleDOI

Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs

TL;DR: It is demonstrated that human pre-miRNA nuclear export, and miRNA function, are dependent on Exportin-5, an additional cellular cofactor required for miRNA biogenesis and function.
Journal ArticleDOI

Nuclear Export of MicroRNA Precursors

TL;DR: Exposure of Exportin-5 (Exp5) mediates efficient nuclear export of short miRNA precursors (pre-miRNAs) and its depletion by RNA interference results in reduced miRNA levels.
Journal ArticleDOI

MicroRNAs AND THEIR REGULATORY ROLES IN PLANTS

TL;DR: The importance of miRNA-directed gene regulation during plant development is now particularly clear and typically at the cores of gene regulatory networks, targeting genes that are themselves regulators, such as those encoding transcription factors and F-box proteins.
Journal ArticleDOI

A microRNA in a multiple-turnover RNAi enzyme complex.

TL;DR: It is shown that, in human cell extracts, the miRNA let-7 naturally enters the RNAi pathway, which suggests that only the degree of complementarity between a miRNA and its RNA target determines its function.
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