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Vanadate inhibits the ATPase activity and DNA binding capability of bacterial MutS. A structural model for the vanadate-MutS interaction at the Walker A motif

TLDR
It is proposed that the orthovanadate inhibition of MutS ATPase can take place by a similar mechanism to that described for other ATPases, and considering that vanadate is an intracellular trace component, this compound could be considered as a new modulator of the MMRS.
Abstract
MutS, a member of the ABC ATPases superfamily, is a mismatch DNA-binding protein constituent of the DNA post-replicative mismatch repair system (MMRS). In this work, it is shown that the ATPase activity of Pseudomonas aeruginosa and Escherichia coli MutS is inhibited by ortho- and decavanadate. Structural comparison of the region involved in the ATP binding of E.coli MutS with the corresponding region of other ABC ATPases inhibited by vanadate, including the myosin‐ orthovanadate‐Mg complex, showed that they are highly similar. From these results it is proposed that the orthovanadate inhibition of MutS ATPase can take place by a similar mechanism to that described for other ATPases. Docking of decavanadate on the ATP-binding region of MutS showed that the energetically more favorable interaction of this compound would take place with the complex MutS‐ ADP‐Mg, suggesting that the inhibitory effect could be produced by a steric impediment of the protein ATP/ADP exchange. Besides the effect observed on the ATPase activity, vanadate also affects the DNAbinding capability of the protein, and partially inhibits the oligomerization of MutS and the temperature-induced inactivation of the protein. From the results obtained, and considering that vanadate is an intracellular trace component, this compound could be considered as a new modulator of the MMRS.

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MATE Transporters Facilitate Vacuolar Uptake of Epicatechin 3′-O-Glucoside for Proanthocyanidin Biosynthesis in Medicago truncatula and Arabidopsis

Jian Zhao, +1 more
- 01 Aug 2009 - 
TL;DR: It is concluded that MATE1 is an essential membrane transporter for proanthocyanidin biosynthesis in the Medicago seed coat on the basis of biochemical properties, tissue-specific expression pattern, and genetic loss-of-function analysis.
Journal ArticleDOI

Gating of TRP channels: a voltage connection?

TL;DR: A thermodynamic principle is elaborated, which predicts that the small gating charge of TRP channels is a crucial factor for the large voltage shifts induced by various stimuli, and indicates that, although the voltage sensor is not yet known, the C‐terminus may substantially change the voltage dependence of these channels.
Journal ArticleDOI

Identification of novel specific and general inhibitors of the three major human ATP-binding cassette transporters P-gp, BCRP and MRP2 among registered drugs.

TL;DR: The inhibitor specificities of P-gp, BCRP and MRP2 were shown to be highly overlapping and general ABC inhibitors were more lipophilic and aromatic than specific inhibitors and non-inhibitors.
Journal ArticleDOI

MATE2 Mediates Vacuolar Sequestration of Flavonoid Glycosides and Glycoside Malonates in Medicago truncatula

TL;DR: The functional characterization of a multidrug and toxin extrusion transporter (MATE2), from Medicago truncatula, is reported, which transports glycosylated flavonoids into the vacuole, showing higher transport efficiency with anthocyanins than other flavonoid glycosides, and an increase in transport efficiency for malonylated Flavonoid glucosides.
Journal ArticleDOI

Decavanadate (V10 O28 6-) and oxovanadates: oxometalates with many biological activities.

TL;DR: In vivo effects of decavanadate in piscine models demonstrated that antioxidant stress markers, lipid peroxidation and vanadium subcellular distribution is dependent upon whether or not the solutions administered contain decavan adate.
References
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Journal ArticleDOI

Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function

TL;DR: It is shown that both the traditional and Lamarckian genetic algorithms can handle ligands with more degrees of freedom than the simulated annealing method used in earlier versions of AUTODOCK, and that the Lamarckia genetic algorithm is the most efficient, reliable, and successful of the three.
Journal ArticleDOI

GROMACS 3.0: a package for molecular simulation and trajectory analysis

TL;DR: The design includes an extraction of virial and periodic boundary conditions from the loops over pairwise interactions, and special software routines to enable rapid calculation of x–1/2.
Journal ArticleDOI

A simple method for the preparation of 32P-labelled adenosine triphosphate of high specific activity

IM Glynn, +1 more
- 01 Jan 1964 - 
TL;DR: Hydrolysis of the labeled ATP with heavy meromyosin indicates that 98 to 99% of the /sup 32/P is in the 1 -phosphate group.
Journal ArticleDOI

Mismatch repair in replication fidelity, genetic recombination, and cancer biology.

TL;DR: Homologs of bacterial MutS and MutL, which play key roles in mismatch recognition and initiation of repair, have been identified in yeast and mammalian cells and results in a large increase in spontaneous mutability.
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