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Alexander J. Federation

Researcher at Harvard University

Publications -  31
Citations -  2919

Alexander J. Federation is an academic researcher from Harvard University. The author has contributed to research in topics: Chromatin & Enhancer. The author has an hindex of 15, co-authored 30 publications receiving 2342 citations. Previous affiliations of Alexander J. Federation include Broad Institute & University of Rochester.

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NF-κB Directs Dynamic Super Enhancer Formation in Inflammation and Atherogenesis

TL;DR: A chemical genetic approach reveals a requirement for BET bromodomains in communicating enhancer remodeling to RNA Polymerase II and orchestrating the transition to the inflammatory cell state, demonstrated in activated endothelium and macrophages.
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RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity.

TL;DR: It is proposed that the RNA exosome protects divergently transcribed lncRNA expressing enhancers by resolving deleterious transcription-coupled secondary DNA structures, while also regulating long-range super-enhancer chromosomal interactions important for cellular function.
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Convergent transcription at intragenic super-enhancers targets AID-initiated genomic instability.

TL;DR: It is reported that most robust AID off-target translocations occur within highly focal regions of target genes in which sense and antisense transcription converge, and it is found that such AID-targeting "convergent" transcription arises fromantisense transcription that emanates from super-enhancers within sense transcribed gene bodies.