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Chaochun Wei
Researcher at Shanghai Jiao Tong University
Publications - 60
Citations - 4597
Chaochun Wei is an academic researcher from Shanghai Jiao Tong University. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 23, co-authored 52 publications receiving 3746 citations. Previous affiliations of Chaochun Wei include Washington University in St. Louis & Chinese Academy of Sciences.
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Journal ArticleDOI
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
Lincoln Stein,Zhirong Bao,Zhirong Bao,Darin Blasiar,Thomas Blumenthal,Michael R. Brent,Nansheng Chen,Asif T. Chinwalla,Laura Clarke,Chris Clee,Avril Coghlan,Alan Coulson,Alan Coulson,Peter D'Eustachio,Peter D'Eustachio,David H. A. Fitch,Lucinda Fulton,Robert E Fulton,Sam Griffiths-Jones,Todd W. Harris,LaDeana W. Hillier,LaDeana W. Hillier,Ravi Kamath,Patricia E. Kuwabara,Elaine R. Mardis,Marco A. Marra,Marco A. Marra,Tracie L. Miner,Patrick Minx,James C. Mullikin,James C. Mullikin,Robert W. Plumb,Jane Rogers,Jacqueline E. Schein,Jacqueline E. Schein,Marc Sohrmann,John Spieth,Jason E. Stajich,Chaochun Wei,David Willey,Richard K. Wilson,Richard Durbin,Robert H. Waterston,Robert H. Waterston +43 more
TL;DR: Comparisons of the two genomes exhibit extensive colinearity, and the rate of divergence appears to be higher in the chromosomal arms than in the centers, which will help to understand the evolutionary forces that mold nematode genomes.
Journal ArticleDOI
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
Wensheng Wang,Ramil Mauleon,Zhiqiang Hu,Dmytro Chebotarov,Shuaishuai Tai,Zhichao Wu,Min Li,Tianqing Zheng,Roven Rommel Fuentes,Fan Zhang,Locedie Mansueto,Dario Copetti,Dario Copetti,Millicent D. Sanciangco,Kevin Palis,Jianlong Xu,Chen Sun,Binying Fu,Hongliang Zhang,Yongming Gao,Xiuqin Zhao,Fei Shen,Xiao Cui,Hong Yu,Zichao Li,Miaolin Chen,Jeffrey Detras,Yongli Zhou,Xinyuan Zhang,Yue Zhao,Dave Kudrna,Chunchao Wang,Rui Li,Jia Ben,Jinyuan Lu,Xianchang He,Zhaotong Dong,Jiabao Xu,Yanhong Li,Miao Wang,Jianxin Shi,Jing Li,Dabing Zhang,Seunghee Lee,Wushu Hu,Alexander Poliakov,Inna Dubchak,Inna Dubchak,Victor Jun Ulat,Frances Nikki Borja,John Robert Mendoza,Jauhar Ali,Qiang Gao,Yongchao Niu,Zhen Yue,Ma. Elizabeth B. Naredo,Jayson Talag,Xueqiang Wang,Jinjie Li,Xiaodong Fang,Ye Yin,Jean-Christophe Glaszmann,Jianwei Zhang,Jiayang Li,Ruaraidh Sackville Hamilton,Rod A. Wing,Rod A. Wing,Jue Ruan,Gengyun Zhang,Chaochun Wei,Nickolai Alexandrov,Kenneth L. McNally,Zhikang Li,Hei Leung +73 more
TL;DR: Analyses of genetic variation and population structure based on over 3,000 cultivated rice (Oryza sativa) genomes reveal subpopulations that correlate with geographic location and patterns of introgression consistent with multiple rice domestication events.
Journal ArticleDOI
Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in mice
Chenhong Zhang,Menghui Zhang,Shengyue Wang,Ruijun Han,Youfang Cao,Weiying Hua,Yuejian Mao,Xiaojun Zhang,Xiaoyan Pang,Chaochun Wei,Guoping Zhao,Yan（陈雁） Chen,Liping Zhao +12 more
TL;DR: Diet has a dominating role in shaping gut microbiota and changes of some key populations may transform the gut microbiota of Wt animals into a pathogen-like entity relevant to development of MS, despite a complete host genome.
Journal ArticleDOI
Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing.
Zongxin Ling,Jianming Kong,Peng Jia,Chaochun Wei,Yuezhu Wang,Zhiwen Pan,Wujing Huang,Lanjuan Li,Hui Chen,Charlie Xiang +9 more
TL;DR: The enormous diversity of oral microbiota allowed for a better understanding of oral microecosystem, and these pathogenic populations in plaque provide new insights into the etiology of dental caries and suggest new targets for interventions of the disease.
Journal ArticleDOI
Whole-genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia.
Xiao Gou,Zhen Wang,Ning Li,Feng Qiu,Ze Xu,Yan Dawei,Shuli Yang,Jia Jia,Xiaoyan Kong,Zehui Wei,Lu Shaoxiong,Linsheng Lian,C. X. Wu,Xueyan Wang,Guozhi Li,Teng Ma,Qiang Jiang,Xue Zhao,Jiaqiang Yang,Baohong Liu,Dongkai Wei,Hong Li,Jianfa Yang,Yulin Yan,Guiying Zhao,Xingxing Dong,Li Mingli,Weidong Deng,Jing Leng,Chaochun Wei,Chuan Wang,H. M. Mao,Hao Zhang,Guohui Ding,Yixue Li +34 more
TL;DR: The results not only indicate parallel evolution of humans and dogs in adaptation to high-altitude hypoxia, but also provide a new opportunity to study the role of EPAS1 in the adaptive processes.