Kelly M. McGarvey

TL;DR: The approach to utilizing available RNA-Seq and other data types in the authors' manual curation process for vertebrate, plant, and other species is summarized, and a new direction for prokaryotic genomes and protein name management is described.

TL;DR: The National Center for Biotechnology Information (NCBI) Reference Sequence (RefSeq) database is a collection of annotated genomic, transcript and protein sequence records derived from data in public sequence archives and from computation, curation and collaboration.

TL;DR: Proteomic analysis of DCIS revealed differential expression patterns distinct from previous nucleic acid-based studies and identified new facets of the earliest stage of breast cancer progression.

TL;DR: The current status and recent growth in the CCDS dataset is described, as well as recent changes to the web and FTP sites, which include more explicit reporting about the NCBI and Ensembl annotation releases being compared, new search and display options, the addition of biologically descriptive information and the approach to representing genes for which support evidence is incomplete.

TL;DR: The Matched Annotation from NCBI and EMBL-EBI (MANE) collaboration as mentioned in this paper is a set of transcripts and corresponding proteins annotated for each human protein-coding gene.