L
Laurent Farinelli
Researcher at DuPont
Publications - 73
Citations - 6792
Laurent Farinelli is an academic researcher from DuPont. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 39, co-authored 73 publications receiving 6054 citations. Previous affiliations of Laurent Farinelli include Friedrich Miescher Institute for Biomedical Research & Scripps Research Institute.
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Journal ArticleDOI
The genome of Tetranychus urticae reveals herbivorous pest adaptations
Miodrag Grbic,Miodrag Grbic,Thomas Van Leeuwen,Richard M. Clark,Stephane Rombauts,Pierre Rouzé,Vojislava Grbic,Vojislava Grbic,Edward J. Osborne,Wannes Dermauw,Phuong Cao Thi Ngoc,Félix Ortego,Pedro Hernández-Crespo,Isabel Diaz,Manuel Martinez,Maria Navajas,Élio Sucena,Élio Sucena,Sara Magalhães,Lisa M. Nagy,Ryan M. Pace,Sergej Djuranovic,Guy Smagghe,Masatoshi Iga,Olivier Christiaens,Jan A. Veenstra,John Ewer,Rodrigo Mancilla Villalobos,Jeffrey L. Hutter,Stephen D. Hudson,Marisela Vélez,Marisela Vélez,Soojin V. Yi,Jia Zeng,Andre Pires-daSilva,Fernando Roch,Marc Cazaux,Marie Navarro,Vladimir Zhurov,Gustavo Acevedo,Anica Bjelica,Jeffrey A. Fawcett,Jeffrey A. Fawcett,Eric Bonnet,Eric Bonnet,Cindy Martens,Guy Baele,Lothar Wissler,Aminael Sánchez-Rodríguez,Luc Tirry,Catherine Blais,Kristof Demeestere,Stefan R. Henz,T. Ryan Gregory,Johannes Mathieu,Lou Verdon,Laurent Farinelli,Jeremy Schmutz,Erika Lindquist,René Feyereisen,Yves Van de Peer +60 more
TL;DR: The Tetranychus urticae genome is the smallest known arthropod genome as discussed by the authors, which represents the first complete chelicerate genome for a pest and has been annotated with genes associated with feeding on different hosts.
Journal ArticleDOI
De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
TL;DR: This study proposes a de novo assembler software that generates a set of accurate contigs of several kilobases that cover most of the bacterial genome on the Illumina sequencing platform that produces millions of very short sequences that are 35 bases in length.
Journal ArticleDOI
The genome of the fire ant Solenopsis invicta
Yannick Wurm,John Wang,Oksana Riba-Grognuz,Miguel Corona,Sanne Nygaard,Brendan G. Hunt,Krista K. Ingram,Laurent Falquet,Mingkwan Nipitwattanaphon,Dietrich Gotzek,Michiel B. Dijkstra,Jan Oettler,Fabien Comtesse,Cheng-Jen Shih,Wen-Jer Wu,Chin-Cheng Yang,Jérôme Thomas,Emmanuel Beaudoing,Sylvain Pradervand,Volker Flegel,Erin D. Cook,Roberto Fabbretti,Heinz Stockinger,Li Long,William G. Farmerie,Jane Oakey,Jacobus J. Boomsma,Pekka Pamilo,Soojin V. Yi,Jürgen Heinze,Michael A. D. Goodisman,Laurent Farinelli,Keith Harshman,Nicolas Hulo,Lorenzo Cerutti,Ioannis Xenarios,DeWayne Shoemaker,Laurent Keller +37 more
TL;DR: A phylogenetic analysis revealed that an ancestral vitellogenin gene first underwent a duplication that was followed by possibly independent duplications of each of the daughter viteLLogenins, possibly reflecting differential selection acting on the queen and worker castes.
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Metagenomic study of the oral microbiota by Illumina high-throughput sequencing
Vladimir Lazarevic,Katrine Whiteson,Susan M. Huse,David Hernandez,Laurent Farinelli,Magne Osteras,Jacques Schrenzel,Patrice Francois +7 more
TL;DR: The V5 hypervariable region of the 16S ribosomal RNA (rRNA) gene is identified as a short region providing reliable identification of bacterial sequences available in public databases such as the Human Oral Microbiome Database, and several taxa not yet discovered in these types of samples are identified.
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Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP)
Kerstin Kaufmann,Jose M. Muiño,Magne Osteras,Laurent Farinelli,Paweł Krajewski,Gerco C. Angenent +5 more
TL;DR: The ChIP procedure is optimized for high signal-to-noise ratio starting with tissue fixation, followed by nuclei isolation, immunoprecipitation, DNA amplification and purification, and the complete protocol for ChIP-SEQ/ChIP-CHIP sample preparation takes ∼7 d.