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Showing papers by "Ralph Charles Mac Nally published in 2013"


Journal ArticleDOI
08 May 2013-PLOS ONE
TL;DR: A new conceptual model for ecosystem risk assessment founded on a synthesis of relevant ecological theories is presented, providing a consistent, practical and theoretically grounded framework for establishing a systematic Red List of the world’s ecosystems.
Abstract: An understanding of risks to biodiversity is needed for planning action to slow current rates of decline and secure ecosystem services for future human use. Although the IUCN Red List criteria provide an effective assessment protocol for species, a standard global assessment of risks to higher levels of biodiversity is currently limited. In 2008, IUCN initiated development of risk assessment criteria to support a global Red List of ecosystems. We present a new conceptual model for ecosystem risk assessment founded on a synthesis of relevant ecological theories. To support the model, we review key elements of ecosystem definition and introduce the concept of ecosystem collapse, an analogue of species extinction. The model identifies four distributional and functional symptoms of ecosystem risk as a basis for assessment criteria: A) rates of decline in ecosystem distribution; B) restricted distributions with continuing declines or threats; C) rates of environmental (abiotic) degradation; and D) rates of disruption to biotic processes. A fifth criterion, E) quantitative estimates of the risk of ecosystem collapse, enables integrated assessment of multiple processes and provides a conceptual anchor for the other criteria. We present the theoretical rationale for the construction and interpretation of each criterion. The assessment protocol and threat categories mirror those of the IUCN Red List of species. A trial of the protocol on terrestrial, subterranean, freshwater and marine ecosystems from around the world shows that its concepts are workable and its outcomes are robust, that required data are available, and that results are consistent with assessments carried out by local experts and authorities. The new protocol provides a consistent, practical and theoretically grounded framework for establishing a systematic Red List of the world’s ecosystems. This will complement the Red List of species and strengthen global capacity to report on and monitor the status of biodiversity

491 citations


Journal ArticleDOI
TL;DR: In this paper, the authors synthesize current knowledge of the vulnerability of riparian ecosystems to climate change by assessing the potential exposure, sensitivity, and adaptive capacity of their key components and processes, as well as ecosystem functions, goods and services, to projected global climatic changes.
Abstract: Riparian ecosystems in the 21st century are likely to play a critical role in determining the vulnerability of natural and human systems to climate change, and in influencing the capacity of these systems to adapt. Some authors have suggested that riparian ecosystems are particularly vulnerable to climate change impacts due to their high levels of exposure and sensitivity to climatic stimuli, and their history of degradation. Others have highlighted the probable resilience of riparian ecosystems to climate change as a result of their evolution under high levels of climatic and environmental variability. We synthesize current knowledge of the vulnerability of riparian ecosystems to climate change by assessing the potential exposure, sensitivity, and adaptive capacity of their key components and processes, as well as ecosystem functions, goods and services, to projected global climatic changes. We review key pathways for ecological and human adaptation for the maintenance, restoration and enhancement of riparian ecosystem functions, goods and services and present emerging principles for planned adaptation. Our synthesis suggests that, in the absence of adaptation, riparian ecosystems are likely to be highly vulnerable to climate change impacts. However, given the critical role of riparian ecosystem functions in landscapes, as well as the strong links between riparian ecosystems and human well-being, considerable means, motives and opportunities for strategically planned adaptation to climate change also exist. The need for planned adaptation of and for riparian ecosystems is likely to be strengthened as the importance of many riparian ecosystem functions, goods and services will grow under a changing climate. Consequently, riparian ecosystems are likely to become adaptation ‘hotspots’ as the century unfolds.

283 citations


Journal ArticleDOI
Toby A. Gardner1, Toby A. Gardner2, Joice Ferreira3, Jos Barlow1, Alexander C. Lees4, Luke Parry1, Ima Célia Guimarães Vieira4, Erika Berenguer1, Ricardo Abramovay5, Alexandre Aleixo4, Christian B. Andretti6, Luiz E. O. C. Aragão7, Ivanei S. Araujo4, Williams Souza de Ávila, Richard D. Bardgett1, Mateus Batistella3, Rodrigo Anzolin Begotti8, Troy Patrick Beldini9, Driss Ezzine de Blas10, Rodrigo Fagundes Braga11, Danielle L. Braga11, Janaina Gomes de Brito6, Plínio Barbosa de Camargo5, Fabiane Campos dos Santos9, Vívian Campos de Oliveira6, Amanda Cardoso Nunes Cordeiro, Thiago Moreira Cardoso3, Déborah Reis de Carvalho11, Sergio Castelani5, Júlio C M Chaul12, Carlos Eduardo Pellegrino Cerri8, Francisco de Assis Costa13, Carla Daniele Furtado da Costa, Emilie Coudel10, Emilie Coudel3, Alexandre Camargo Coutinho3, Dênis Antônio da Cunha12, Álvaro de Oliveira D'Antona14, Joelma Dezincourt4, Karina Dias-Silva15, Mariana Regina Durigan8, Júlio César Dalla Mora Esquerdo3, José Gustavo Féres16, Silvio Frosini de Barros Ferraz8, Amanda Estefânia de Melo Ferreira4, Ana Carolina Fiorini17, Lenise Vargas Flores da Silva9, Fábio S. Frazão11, Rachel Garrett18, Alessandra dos Santos Gomes4, Karoline da Silva Gonçalves4, José Benito Guerrero19, Neusa Hamada6, Robert M. Hughes20, Danilo Carmago Igliori5, Ederson da Conceição Jesus3, Leandro Juen13, Miércio Júnior9, José Max Barbosa de Oliveira Junior21, Raimundo Cosme de Oliveira Junior3, Carlos Souza Junior, Phil Kaufmann22, Vanesca Korasaki11, Cecília Gontijo Leal11, Rafael P. Leitão6, Natália Lima, Maria de Fátima Lopes Almeida, Reinaldo Lourival, Julio Louzada11, Ralph Charles Mac Nally23, Sébastien Marchand12, Márcia Motta Maués3, Fatima Maria de Souza Moreira11, Carla Morsello5, Nárgila G. Moura4, Jorge Luiz Nessimian17, Sâmia Nunes, Victor H. F. Oliveira11, Renata Pardini5, Heloisa Correia Pereira14, Paulo Santos Pompeu11, Carla R. Ribas11, Felipe Rossetti8, Fernando A. Schmidt11, Rodrigo Ferreira da Silva9, Regina Célia Viana Martins da Silva3, Thiago Fonseca Morello Ramalho da Silva5, Juliana M. Silveira11, João V. Siqueira, Teotonio Soares de Carvalho11, Ricardo R. C. Solar13, Ricardo R. C. Solar1, Nicola Savério Holanda Tancredi13, James Robertson Thomson23, Patricia Carignano Torres5, Fernando Z. Vaz-de-Mello, Ruan Carlo Stulpen Veiga24, Adriano Venturieri3, Cecilia Fadigas Viana4, Diana Weinhold25, Ronald Zanetti11, Jansen Zuanon6 
TL;DR: The Sustainable Amazon Network (Rede Amazônia Sustentável, RAS), a multidisciplinary research initiative involving more than 30 partner organizations working to assess both social and ecological dimensions of land-use sustainability in eastern Brazilian Amazonia, is presented.
Abstract: Science has a critical role to play in guiding more sustainable development trajectories. Here, we present the Sustainable Amazon Network (Rede Amazonia Sustentavel, RAS): a multidisciplinary research initiative involving more than 30 partner organizations working to assess both social and ecological dimensions of land-use sustainability in eastern Brazilian Amazonia. The research approach adopted by RAS offers three advantages for addressing land-use sustainability problems: (i) the collection of synchronized and co-located ecological and socioeconomic data across broad gradients of past and present human use; (ii) a nested sampling design to aid comparison of ecological and socioeconomic conditions associated with different land uses across local, landscape and regional scales; and (iii) a strong engagement with a wide variety of actors and non-research institutions. Here, we elaborate on these key features, and identify the ways in which RAS can help in highlighting those problems in most urgent need of attention, and in guiding improvements in land-use sustainability in Amazonia and elsewhere in the tropics. We also discuss some of the practical lessons, limitations and realities faced during the development of the RAS initiative so far.

158 citations


Journal ArticleDOI
TL;DR: The evidence for widespread assemblage-level phase shifts across eastern Australia is reviewed, triggered partly by anthropogenic habitat alteration and mediated by a native, despotic bird: the noisy miner Manorina melanocephala.
Abstract: AimReports of profound changes in species assemblages brought about by the influence of strongly interacting species are increasingly common. Where these strong interactors are sensitive to anthropogenic habitat changes, relatively small alterations in the environment can result in large and pervasive shifts in assemblages. We review the evidence for widespread assemblage-level phase shifts across eastern Australia, triggered partly by anthropogenic habitat alteration and mediated by a native, despotic bird: the noisy miner Manorina melanocephala.

92 citations


Journal ArticleDOI
TL;DR: In this paper, the authors combined stochastic, population dynamics models for four fish species with differing life histories with simulated regulated and unregulated flow regimes to assess the relative robustness of fish population persistence to different scenarios of climate change and water management.
Abstract: Water-resource management should maintain ecological condition, including population viabilities of aquatic taxa. Many arid and semi-arid regions have experienced elevated water regulation and face drying and warming climates. We combined stochastic, population dynamics models for four fish species with differing life histories with simulated regulated and unregulated flow regimes to assess the relative robustness of fish population persistence to different scenarios of climate change and water management. Water regulation had a larger effect than differences in climate, negatively affecting one species through increased summer flows, and stabilizing population trajectories for two species that were sensitive to cease-to-flow events; the other species was insensitive to regulation or climate. The greater importance of water regulation suggests that management of water regulation and human use can be used to insulate fish, to some degree, from the effects of future climate change. General deductions from our results, such as the importance of inter-annual variability and the application of demographic modelling tools, are readily transferable to other systems. Synthesis and applications. Our scenario-based approach was able to assess the population-level effects of multiple concurrent stressors and represents an effective framework for identifying management strategies that are robust to uncertainty in future environments. © 2013 The Authors. Journal of Applied Ecology © 2013 British Ecological Society.

36 citations


Journal ArticleDOI
TL;DR: In this article, the authors investigated whether, and how, the structure, composition and carbon content changed over a period of extended drought (the "Big Dry") in a much-modified forest ecosystem.
Abstract: Aim Climate change has been linked to negative effects on vegetation, including drought-induced dieback. Large-scale dieback not only leads to considerable carbon emissions but often leads to loss of ecological resources. We investigated whether, and how, the structure, composition and carbon content changed over a period of extended drought (the ‘Big Dry’) in a much-modified forest ecosystem. We explored whether landscape configuration, management practice or soil type influenced vegetation change. Location The Box-Ironbark forests of south-eastern Australia. Methods In 2010, we remeasured 120 forest transects that had first been measured in 1997 by using identical field methods. Vegetation structure and composition were quantified. We used allometric growth models to estimate the expected increase in above-ground carbon (AGC) storage between 1997 and 2010; these estimates were compared with observed values.

33 citations


Journal ArticleDOI
TL;DR: In this paper, the effects of replanting on stream ecosystem processes are detectable even when the spatial scale of restoration is relatively small in a whole-of-catchment context. But the effectiveness of revegetation is usually measured by responses in biodiversity, which may differ between isolated replanted patches.
Abstract: Summary The effectiveness of revegetation is usually gauged by responses in biodiversity, which may differ between isolated replanted patches. The ecological value of revegetation may be detected more effectively by monitoring ecosystem processes. In-stream metabolism has been much modified by the degradation of riparian vegetation in agricultural landscapes around the world. We sought to determine whether the spatial scale typical of most riparian replanting projects (i.e. <1 km long) influences stream metabolism. Metabolism is a functional measure that incorporates gross primary production (GPP), ecosystem respiration (ER) and the difference between them [net ecosystem productivity (NEP)]. We hypothesised that replanted reaches would have lower GPP (due to greater canopy shading) and greater ER (governed by larger terrestrial energy inputs) compared with pasture reaches. We measured metabolism in paired reaches within four agricultural streams. Two streams had an untreated pasture reach contrasted with a reach replanted with native woody vegetation >17 years ago. The other two streams had similar riparian vegetation condition adjacent to both reaches, to act as reference sites. Mean daily GPP (0.27–4.9 g O2 m−2 day−1) and ER (1.1–22 g O2 m−2 day−1) were within the range of values recorded previously in agricultural streams elsewhere. Replanted reaches had rates of NEP lower than upstream untreated reaches at treatment sites, but NEP was similar between reaches at reference sites. The effects of replanting on stream ecosystem processes are detectable even when the spatial scale of restoration is relatively small in a whole-of-catchment context. Land managers can protect and restore vegetation at feasible spatial scales and benefit ecosystem processes. Ecosystem metabolism should be included in the range of responses that need to be monitored to provide a complete picture of the effectiveness of stream restoration.

28 citations


Journal ArticleDOI
TL;DR: A model-based adaptive spatial sampling method for the construction of occurrence maps and demonstrates that the adaptive strategy can lead to substantial improvement in occurrence mapping.
Abstract: In many environmental management problems, the construction of occurrence maps of species of interest is a prerequisite to their effective management. However, the construction of occurrence maps is a challenging problem because observations are often costly to obtain (thus incomplete) and noisy (thus imperfect). It is therefore critical to develop tools for designing efficient spatial sampling strategies and for addressing data uncertainty. Adaptive sampling strategies are known to be more efficient than non-adaptive strategies. Here, we develop a model-based adaptive spatial sampling method for the construction of occurrence maps. We apply the method to estimate the occurrence of one of the world's worst invasive species, the red imported fire ant, in and around the city of Brisbane, Australia. Our contribution is threefold: (i) a model of uncertainty about invasion maps using the classical image analysis probabilistic framework of Hidden Markov Random Fields (HMRF), (ii) an original exact method for optimal spatial sampling with HMRF and approximate solution algorithms for this problem, both in the static and adaptive sampling cases, (iii) an empirical evaluation of these methods on simulated problems inspired by the fire ants case study. Our analysis demonstrates that the adaptive strategy can lead to substantial improvement in occurrence mapping.

20 citations


Journal ArticleDOI
TL;DR: In this article, the authors focused on assessing how the "Big Dry" (severe drought, 1997-2010) in southeastern Australia affected populations of a small marsupial carnivore, the yellow-footed antechinus (Antechinus flavipes), in box-ironbark forests, which suffer a range of anthropogenic disturbances.
Abstract: The imposition of the stresses of climate change (higher temperatures and in many regions lower rainfall) on existing stressors, such as habitat loss and degradation, will increase pressures on native fauna already experiencing declines. We focused on assessing how the ‘Big Dry’ (severe drought, 1997‐2010) in southeastern Australia affected populations of a small marsupial carnivore, the yellow-footed antechinus (Antechinus flavipes), in box-ironbark forests, which suffer a range of anthropogenic disturbances. Trapping of the mammal was conducted on 136 (0.25 ha) sites in two box-ironbark forests in 2004, 2005 and 2011 (46 or 64 sites per year). Capture rates of all distinct individuals, males and second-year females with suckled teats, and the number of suckled teats were positively associated with rainfall in the previous September (time of lactation and deposition of young in nests). Despite differences between forests in capture rates of all individuals, the positive effect of rainfall was evident in both forests. Populations in one forest, Chiltern, were substantially larger than other locations surveyed in 2004 and 2005, yet crashed to small numbers in 2011. This crash was most likely due to low rainfall in the preceding years including the lowest recorded annual rainfall (2006), below-average annual rainfall (2007, 2008 and 2009) and well-below-average rainfall in September (2006, 2007 and 2008). The predicted drying and warming climate in southeastern Australia and habitat loss and degradation pose a threat to the viability of the yellow-footed antechinus in boxironbark forests. An integrated approach to small-mammal management is necessary given that the region may be facing additional losses, especially during droughts, to those already experienced since the early 1800s. Our work emphasizes the need to identify specific effects of stressors on vital demographic characteristics of species.

18 citations


Journal ArticleDOI
TL;DR: SAD shape, the core component in SAD theory, may hold little information about how assemblages are governed ecologically and may result from statistical processes, which, if general, would indicate that SAD shape is not useful for distinguishing among theories of assemblage structure.
Abstract: Community ecologists have attempted to explain species abundance distribution (SAD) shape for more than 80 years, but usually without relating SAD shape explicitly to ecological variables. We explored whether the scale (total assemblage abundance) and shape (assemblage evenness) of avifaunal SADs were related to ecological covariates. We used data on avifaunas, in-site habitat structure and landscape context that were assembled from previous studies; this amounted to 197 transects distributed across 16,000 km(2) of the box-ironbark forests of southeastern Australia. We used Bayesian conditional autoregressive models to link SAD scale and shape to these ecological covariates. Variation in SAD scale was relatable to some ecological covariates, especially to landscape vegetation cover and to tree height. We could not find any relationships between SAD shape and ecological covariates. SAD shape, the core component in SAD theory, may hold little information about how assemblages are governed ecologically and may result from statistical processes, which, if general, would indicate that SAD shape is not useful for distinguishing among theories of assemblage structure.

18 citations