S
Sanja Rogic
Researcher at University of British Columbia
Publications - 41
Citations - 5101
Sanja Rogic is an academic researcher from University of British Columbia. The author has contributed to research in topics: Gene & Diffuse large B-cell lymphoma. The author has an hindex of 16, co-authored 38 publications receiving 4586 citations. Previous affiliations of Sanja Rogic include University of California, Santa Cruz & BC Cancer Agency.
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Journal ArticleDOI
Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma
Ryan D. Morin,Maria Mendez-Lago,Andrew J. Mungall,Rodrigo Goya,Karen Mungall,Richard Corbett,Nathalie A. Johnson,Tesa M. Severson,Readman Chiu,Matthew A. Field,Shaun D. Jackman,Martin Krzywinski,David W. Scott,Diane L. Trinh,Jessica Tamura-Wells,Sa Li,Marlo Firme,Sanja Rogic,Malachi Griffith,Susanna Chan,Oleksandr Yakovenko,Irmtraud M. Meyer,Eric Y. Zhao,Duane E. Smailus,Michelle Moksa,Suganthi Chittaranjan,Lisa M. Rimsza,Angela Brooks-Wilson,Angela Brooks-Wilson,John J. Spinelli,Susana Ben-Neriah,Barbara Meissner,Bruce Woolcock,Merrill Boyle,Helen McDonald,Angela Tam,Yongjun Zhao,Allen Delaney,Thomas Zeng,Kane Tse,Yaron S.N. Butterfield,Inanc Birol,Robert A. Holt,Jacqueline E. Schein,Douglas E. Horsman,Richard A. Moore,Steven J.M. Jones,Joseph M. Connors,Martin Hirst,Randy D. Gascoyne,Marco A. Marra +50 more
TL;DR: Genes with roles in histone modification were frequent targets of somatic mutation and suggest a previously unappreciated disruption of chromatin biology in lymphomagenesis in NHLs.
Journal ArticleDOI
A physical map of the human genome.
John Douglas Mcpherson,Marco A. Marra,Marco A. Marra,LaDeana W. Hillier,Robert H. Waterston,Asif T. Chinwalla,John W. Wallis,Mandeep Sekhon,Kristine M. Wylie,Elaine R. Mardis,Richard K. Wilson,Robert S. Fulton,Tamara A. Kucaba,Caryn Wagner-McPherson,William B. Barbazuk,Simon G. Gregory,Sean Humphray,Lisa French,R Evans,Graeme Bethel,Adam Whittaker,Jane L. Holden,Owen T. McCann,Andrew Dunham,Carol Soderlund,Carol Scott,David R. Bentley,Gregory D. Schuler,Hsiu Chuan Chen,Wonhee Jang,Eric D. Green,Jacquelyn R. Idol,Valerie Maduro,Kate Montgomery,Eunice Lee,Ashley Miller,Suzanne Emerling,Raju Kucherlapati,Richard A. Gibbs,Steve Scherer,J. Harley Gorrell,Erica Sodergren,Kerstin P. Clerc-Blankenburg,Paul E. Tabor,S. Naylor,Dawn Garcia,J. de Jong,J. de Jong,J. de Jong,Joseph J. Catanese,Joseph J. Catanese,Joseph J. Catanese,Norma J. Nowak,Kazutoyo Osoegawa,Kazutoyo Osoegawa,Kazutoyo Osoegawa,Shizhen Qin,Lee Rowen,Anuradha Madan,Monica Dors,Leroy Hood,Barbara J. Trask,Cynthia Friedman,Hillary Massa,Vivian G. Cheung,Ilan R. Kirsch,Thomas Reid,Raluca Yonescu,Jean Weissenbach,Thomas Brüls,Roland Heilig,Elbert Branscomb,Anne S. Olsen,Norman A. Doggett,Jan Fang Cheng,Trevor Hawkins,Richard M. Myers,Jin Shang,Lucía Ramírez,Jeremy Schmutz,Olivia Velasquez,Kami Dixon,Nancy E. Stone,David R. Cox,David Haussler,W. James Kent,Terrence S. Furey,Sanja Rogic,Scot Kennedy,Steven J.M. Jones,André Rosenthal,Gaiping Wen,Markus Schilhabel,Gernot Gloeckner,Gerald Nyakatura,Reiner Siebert,Brigitte Schlegelberger,Julie R. Korenberg,Xiao Ning Chen,Asao Fujiyama,Masahira Hattori,Atsushi Toyoda,Tetsushi Yada,Hong Seok Park,Yoshiyuki Sakaki,Nobuyoshi Shimizu,Shuichi Asakawa,Kazuhiko Kawasaki,Takashi Sasaki,Ai Shintani,Atsushi Shimizu,Kazunori Shibuya,Jun Kudoh,Shinsei Minoshima,Juliane Ramser,Peter Seranski,Céline Hoff,Annemarie Poustka,Richard Reinhardt,Hans Lehrach +119 more
TL;DR: The construction of the whole-genome bacterial artificial chromosome (BAC) map and its integration with previous landmark maps and information from mapping efforts focused on specific chromosomal regions are reported.
Journal ArticleDOI
Concurrent Expression of MYC and BCL2 in Diffuse Large B-Cell Lymphoma Treated With Rituximab Plus Cyclophosphamide, Doxorubicin, Vincristine, and Prednisone
Nathalie A. Johnson,Graham W. Slack,Kerry J. Savage,Joseph M. Connors,Susana Ben-Neriah,Sanja Rogic,David W. Scott,King Tan,Christian Steidl,Laurie H. Sehn,Wing C. Chan,Javeed Iqbal,Paul N. Meyer,Georg Lenz,George E. Wright,Lisa M. Rimsza,Carlo Valentino,Patrick Brunhoeber,Thomas M. Grogan,Rita M. Braziel,James R. Cook,Raymond R. Tubbs,Dennis D. Weisenburger,Elias Campo,Andreas Rosenwald,German Ott,German Ott,Jan Delabie,Christina Holcroft,Elaine S. Jaffe,Louis M. Staudt,Randy D. Gascoyne +31 more
TL;DR: Assessment of MYC and BCL2 expression by IHC represents a robust, rapid, and inexpensive approach to risk-stratify patients with DLBCL at diagnosis.
Journal ArticleDOI
Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing.
Ryan D. Morin,Ryan D. Morin,Karen Mungall,Erin Pleasance,Andrew J. Mungall,Rodrigo Goya,Ryan D. Huff,David W. Scott,Jiarui Ding,Andrew Roth,Readman Chiu,Richard Corbett,Fong Chun Chan,Maria Mendez-Lago,Diane L. Trinh,Diane L. Trinh,Madison Bolger-Munro,Greg Taylor,Alireza Hadj Khodabakhshi,Susana Ben-Neriah,Julia R. Pon,Barbara Meissner,Bruce Woolcock,Noushin Farnoud,Sanja Rogic,Emilia L. Lim,Nathalie A. Johnson,Sohrab P. Shah,Steven J.M. Jones,Steven J.M. Jones,Christian Steidl,Christian Steidl,Robert A. Holt,Robert A. Holt,Inanc Birol,Inanc Birol,Richard A. Moore,Joseph M. Connors,Randy D. Gascoyne,Randy D. Gascoyne,Marco A. Marra,Marco A. Marra +41 more
TL;DR: A whole-genome-sequencing-based perspective ofDLBCL mutational complexity is provided by characterizing 40 de novo DLBCL cases and 13 cell lines and combining these data with DNA copy number analysis and RNA-seq from an extended cohort of 96 cases, which uncovered new gene targets of recurrent somatic point mutations and genes that are targeted by focal somatic deletions in this disease.
Journal ArticleDOI
Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma
Robert Kridel,Robert Kridel,Barbara Meissner,Sanja Rogic,Merrill Boyle,Adele Telenius,Bruce Woolcock,Jay Gunawardana,Jay Gunawardana,Christopher R Jenkins,Chris Cochrane,Susana Ben-Neriah,King Tan,Ryan D. Morin,Stephen Opat,Laurie H. Sehn,Joseph M. Connors,Marco A. Marra,Andrew P. Weng,Christian Steidl,Christian Steidl,Randy D. Gascoyne,Randy D. Gascoyne +22 more
TL;DR: Recurrent NOTCH1 mutations are identified that provide the preclinical rationale for therapeutic inhibition of the NOTCH pathway in a subset of patients with MCL and are shown to reduce proliferation and induced apoptosis in 2 MCL cell lines.