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Xiqi Li
Researcher at Baylor College of Medicine
Publications - 3
Citations - 20
Xiqi Li is an academic researcher from Baylor College of Medicine. The author has contributed to research in topics: Graph (abstract data type) & Genome. The author has an hindex of 2, co-authored 3 publications receiving 7 citations.
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Journal ArticleDOI
CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models.
Lillian R. Thistlethwaite,Varduhi Petrosyan,Xiqi Li,Marcus J. Miller,Sarah H. Elsea,Aleksandar Milosavljevic +5 more
TL;DR: Connect the Dots (CTD) as discussed by the authors is a fast algorithm based on data compression that detects highly connected subsets within S. CTD provides information-theoretic upper bounds on p-values when S contains a small fraction of nodes in G without requiring computationally costly permutation testing.
Posted ContentDOI
Multi-tissue integrative analysis of personal epigenomes
Joel Rozowsky,Jorg Drenkow,Yucheng T. Yang,Gamze Gürsoy,Timur R. Galeev,Beatrice Borsari,Charles B. Epstein,Kun Xiong,Jinrui Xu,Jiahao Gao,Keyang Yu,Ana Berthel,Zhanlin Chen,Fabio C. P. Navarro,Jason Liu,Maxwell Sun,James C. Wright,Justin Chang,Christopher J. F. Cameron,Noam Shoresh,Elizabeth Gaskell,Jessika Adrian,Sergey Aganezov,Gabriela Balderrama-Gutierrez,Samridhi Banskota,Guillermo Corona,Sora Chee,Surya B. Chhetri,Gabriel Martins,Cassidy Danyko,Carrie A. Davis,Daniel Farid,Nina Farrell,Idan Gabdank,Yoel Gofin,David U. Gorkin,Mengting Gu,Vivian Hecht,Benjamin C. Hitz,Robbyn Issner,Melanie Kirsche,Xiangmeng Kong,Bonita R. Lam,Shantao Li,Bian Li,Tianxiao Li,Xiqi Li,Khine Lin,Ruibang Luo,Mark Mackiewicz,Jill Moore,Jonathan M. Mudge,Nicholas Nelson,Chad Nusbaum,Ioann Popov,Henry Pratt,Yunjiang Qiu,Srividya Ramakrishnan,Joe Raymond,Leonidas Salichos,Leonidas Salichos,Alexandra Scavelli,Jacob Schreiber,Fritz J. Sedlazeck,Fritz J. Sedlazeck,Fritz J. Sedlazeck,Lei See,Rachel M. Sherman,Xu Shi,Minyi Shi,Cricket A. Sloan,Seth Strattan,Zhen Tan,Forrest Y. Tanaka,Anna Vlasova,Jun Wang,Jonathan Werner,Brian Williams,Min Xu,Chengfei Yan,Lu Yu,Chris Zaleski,Jing Zhang,Jing Zhang,Michael Cherry,Eric M. Mendenhall,William Stafford Noble,Zhiping Weng,Morgan E. Levine,Alexander Dobin,Barbara J. Wold,Ali Mortazavi,Bing Ren,Jesse Gillis,Richard M. Myers,Michael Snyder,Jyoti S. Choudhary,Aleksandar Milosavljevic,Michael C. Schatz,Michael C. Schatz,Roderic Guigó,Bradley E. Bernstein,Bradley E. Bernstein,Thomas R. Gingeras,Mark Gerstein +104 more
TL;DR: In this paper, the authors constructed phased, diploid genomes for four cadaveric donors (using long-read sequencing) and systematically charted noncoding regulatory elements and transcriptional activity across more than 25 tissues from these donors.
Journal ArticleDOI
Effective Aspirin Treatment of Women at Risk for Preeclampsia Delays the Metabolic Clock of Gestation
Xiqi Li,Aleksandar Milosavljevic,Sarah H. Elsea,Chi Chiu Wang,Fernando Scaglia,Fernando Scaglia,Fernando Scaglia,Argyro Syngelaki,Kypros H. Nicolaides,Liona C. Poon +9 more
TL;DR: In this paper, a metabolomics analysis of 144 high-risk pregnant women before (11-13 weeks) and after (20-23 weeks) aspirin/placebo treatment elucidated metabolic effects of aspirin and metabolic differences potentially associated with the variation of the treatment response.