Showing papers in "Critical Reviews in Biotechnology in 2020"
TL;DR: In this review, the prospective role and function of the Sphingomonas genus is elucidated for improved utilization during environmental biotechnology.
Abstract: The species belonging to the Sphingomonas genus possess multifaceted functions ranging from remediation of environmental contaminations to producing highly beneficial phytohormones, such as sphingan and gellan gum. Recent studies have shown an intriguing role of Sphingomonas species in the degradation of organometallic compounds. However, the actual biotechnological potential of this genus requires further assessment. Some of the species from the genus have also been noted to improve plant-growth during stress conditions such as drought, salinity, and heavy metals in agricultural soil. This role has been attributed to their potential to produce plant growth hormones e.g. gibberellins and indole acetic acid. However, the current literature is scattered, and some of the important areas, such as taxonomy, phylogenetics, genome mapping, and cellular transport systems, are still being overlooked in terms of elucidation of the mechanisms behind stress-tolerance and bioremediation. In this review, we elucidated the prospective role and function of this genus for improved utilization during environmental biotechnology.
195 citations
TL;DR: The efforts to translate AMP-based research findings into pharmaceutical product candidates are expected to accelerate in coming years due to technological advancements in multiple areas, including an improved understanding of the mechanism-of-action of AMPs, smart formulation strategies, and advanced chemical synthesis protocols.
Abstract: The rapid development of microbial resistance to conventional antibiotics has accelerated efforts to find anti-infectives with a novel mode-of-action, which are less prone to bacterial resistance. Intense nonclinical and clinical research is today ongoing to evaluate antimicrobial peptides (AMPs) as potential next-generation antibiotics. Currently, multiple AMPs are assessed in late-stage clinical trials, not only as novel anti-infective drugs, but also as innovative product candidates for immunomodulation, promotion of wound healing, and prevention of post-operative scars. The efforts to translate AMP-based research findings into pharmaceutical product candidates are expected to accelerate in coming years due to technological advancements in multiple areas, including an improved understanding of the mechanism-of-action of AMPs, smart formulation strategies, and advanced chemical synthesis protocols. At the same time, it is recognized that cytotoxicity, low metabolic stability due to sensitivity to proteolytic degradation, and limited oral bioavailability are some of the key weaknesses of AMPs. Furthermore, the pricing and reimbursement environment for new antimicrobial products remains as a major barrier to the commercialization of AMPs.
170 citations
TL;DR: Genomic-wide analysis indicated that AP2/ERF transcription factors were highly conserved during plant evolution and will provide important bases for plant regulatory mechanisms and molecular breeding.
Abstract: In the whole life process, many factors including external and internal factors affect plant growth and development. The morphogenesis, growth, and development of plants are controlled by genetic elements and are influenced by environmental stress. Transcription factors contain one or more specific DNA-binding domains, which are essential in the whole life cycle of higher plants. The AP2/ERF (APETALA2/ethylene-responsive element binding factors) transcription factors are a large group of factors that are mainly found in plants. The transcription factors of this family serve as important regulators in many biological and physiological processes, such as plant morphogenesis, responsive mechanisms to various stresses, hormone signal transduction, and metabolite regulation. In this review, we summarized the advances in identification, classification, function, regulatory mechanisms, and the evolution of AP2/ERF transcription factors in plants. AP2/ERF family factors are mainly classified into four major subfamilies: DREB (Dehydration Responsive Element-Binding), ERF (Ethylene-Responsive-Element-Binding protein), AP2 (APETALA2) and RAV (Related to ABI3/VP), and Soloists (few unclassified factors). The review summarized the reports about multiple regulatory functions of AP2/ERF transcription factors in plants. In addition to growth regulation and stress responses, the regulatory functions of AP2/ERF in plant metabolite biosynthesis have been described. We also discussed the roles of AP2/ERF transcription factors in different phytohormone-mediated signaling pathways in plants. Genomic-wide analysis indicated that AP2/ERF transcription factors were highly conserved during plant evolution. Some public databases containing the information of AP2/ERF have been introduced. The studies of AP2/ERF factors will provide important bases for plant regulatory mechanisms and molecular breeding.
150 citations
TL;DR: Progress in metabolic engineering is summarized in order to solve BC growth limitation and a comprehensive overview of the future applications of BC is provided to provide readers with insight into new economic opportunities of BC and their modifiable properties for various industrial applications.
Abstract: Adoption of biomass for the development of biobased products has become a routine agenda in evolutionary metabolic engineering. Cellulose produced by bacteria is a "rising star" for this sustainable development. Unlike plant cellulose, bacterial cellulose (BC) shows several unique properties like a high degree of crystallinity, high purity, high water retention, high mechanical strength, and enhanced biocompatibility. Favored with those extraordinary properties, BC could serve as ideal biomass for the development of various industrial products. However, a low yield and the requirement for large growth media have been a persistent challenge in mass production of BC. A significant number of techniques has been developed in achieving efficient BC production. This includes the modification of bioreactors, fermentation parameters, and growth media. In this article, we summarize progress in metabolic engineering in order to solve BC growth limitation. This article emphasizes current engineered BC production by using various bioreactors, as well as highlighting the structure of BC fermented by different types of engineered-bioreactors. The comprehensive overview of the future applications of BC, aims to provide readers with insight into new economic opportunities of BC and their modifiable properties for various industrial applications. Modifications in chemical composition, structure, and genetic regulation, which preceded the advancement of BC applications, were also emphasized.
112 citations
TL;DR: This review provides a systemic overview on the approaches of protein structure modification for the improvement of enzyme thermostability during the last decade, including the introduction of non-covalent interactions and covalent bonds.
Abstract: Thermostability is considered to be an important parameter to measure the feasibility of enzymes for industrial applications. Generally, higher thermostability makes an enzyme more competit...
108 citations
TL;DR: Current and future applications of the lung-on-a-chip in the respiratory system will be discussed, and the limitations of current conventional in vitro models used for respiratory disease modeling and drug development will be addressed.
Abstract: Recently, organ-on-a-chip models, which are microfluidic devices that mimic the cellular architecture and physiological environment of an organ, have been developed and extensively investigated. The chips can be tailored to accommodate the disease conditions pertaining to many organs; and in the case of this review, the lung. Lung-on-a-chip models result in a more accurate reflection compared to conventional in vitro models. Pharmaceutical drug testing methods traditionally use animal models in order to evaluate pharmacological and toxicological responses to a new agent. However, these responses do not directly reflect human physiological responses. In this review, current and future applications of the lung-on-a-chip in the respiratory system will be discussed. Furthermore, the limitations of current conventional in vitro models used for respiratory disease modeling and drug development will be addressed. Highlights of additional translational aspects of the lung-on-a-chip will be discussed in order to demonstrate the importance of this subject for medical research.
100 citations
TL;DR: Tetracycline residues have frequently been detected in multi-environmental media, and it could induce antibiotic resistance genes (ARGs) in microorganisms, which has attracted great attention, and biodegradation processes may be a promising strategy to remove tetracyCline.
Abstract: Tetracycline residues have frequently been detected in multi-environmental media, and it could induce antibiotic resistance genes (ARGs) in microorganisms, which has attracted great attention. Where biodegradation processes may be a promising strategy to remove tetracycline. Thus, this study mainly considers: (i) the degradation of tetracycline by microorganisms including single microorganisms and microbial flora; (ii) the elimination of tetracycline during biochemical treatment processes and advanced treatment systems in wastewater treatment plants (WWTPs) and constructed wetlands (CWs); (iii) the degradation of tetracycline by biological coupling processes; (iv) the confusion and problem of tetracycline biodegradation. Furthermore, the characteristics and comparison of tetracycline biodegradation have been discussed in detail. Additionally, future research directions are suggested to reduce tetracycline in the aquatic environment, especially tetracycline biodegradation and the nitrogen conversion process. Highlights Degradation of tetracycline by pure culture strains and microflora was significant. Degradation of tetracycline by biochemical treatment process was summarized. Advanced treatment process in CWs could eliminate tetracycline. Future research directions on biodegradation of tetracycline are proposed.
95 citations
TL;DR: An integrated overview of the possible avenues for enhancing the biosynthesis of high-value marketable molecules produced by plant in vitro systems are presented, including metabolic engineering and CRISPR/Cas9 technology for the regulation of plant metabolism through overexpression/repression of single or multiple structural genes or transcriptional factors.
Abstract: For centuries plants have been intensively utilized as reliable sources of food, flavoring, agrochemical and pharmaceutical ingredients. However, plant natural habitats are being rapidly lost due t...
87 citations
TL;DR: This review will focus on the in vitro and in vivo antimicrobial properties of chitosan and its derivatives, along with a discussion on its mechanism of action during the treatment of infectious animal diseases, as well as its importance in food safety.
Abstract: Chitosan, obtained as a result of the deacetylation of chitin, one of the most important naturally occurring polymers, has antimicrobial properties against fungi, and bacteria. It is also useful in other fields, including: food, biomedicine, biotechnology, agriculture, and the pharmaceutical industries. A literature survey shows that its antimicrobial activity depends upon several factors such as: the pH, temperature, molecular weight, ability to chelate metals, degree of deacetylation, source of chitosan, and the type of microorganism involved. This review will focus on the in vitro and in vivo antimicrobial properties of chitosan and its derivatives, along with a discussion on its mechanism of action during the treatment of infectious animal diseases, as well as its importance in food safety. We conclude with a summary of the challenges associated with the uses of chitosan and its derivatives.
82 citations
TL;DR: This review summarizes the taxa and physiological properties of endophytic microorganisms that may participate in the detoxification of contaminant mixtures and potential biomolecules that may enhance endophyte mediated phytoremediation are discussed.
Abstract: Phytoremediation uses plants and associated microbes to remove pollutants from the environment and is considered a promising bioremediation method. Compared with well-described single contaminant treatments, the number of studies reporting phytoremediation of soil mixed pollutants has increased recently. Endophytes, including bacteria and fungi, exhibit beneficial traits for the promotion of plant growth, stress alleviation, and biodegradation. Moreover, endophytes either directly or indirectly assist host plants to survive high concentrations of organic and inorganic pollutants in the soil. Endophytic microorganisms can also regulate the plant metabolism in different ways, exhibiting a variety of physiological characteristics. This review summarizes the taxa and physiological properties of endophytic microorganisms that may participate in the detoxification of contaminant mixtures. Furthermore, potential biomolecules that may enhance endophyte mediated phytoremediation are discussed. The practical applications of pollutant-degrading endophytes and current strategies for applying this valuable bio-resource to soil phytoremediation are summarized.
67 citations
TL;DR: This review highlights relevant contexts of metabolic genomics, outstanding questions, and strategies for answering them, to guide future research for genetic improvement of nutrition quality for healthier plant foods.
Abstract: The diversity and complexity of secondary metabolites in tea plants contribute substantially to the popularity of tea, by determining tea flavors and their numerous health benefits. The most significant characteristics of tea plants are that they concentrate the complex plant secondary metabolites into one leaf: flavonoids, alkaloids, theanine, volatiles, and saponins. Many fundamental questions regarding tea plant secondary metabolism remain unanswered. This includes how tea plants accumulate high levels of monomeric galloylated catechins, unlike the polymerized flavan-3-ols in most other plants, as well as how they are evolved to selectively synthesize theanine and caffeine, and how tea plants properly transport and store these cytotoxic products and then reuse them in defense. Tea plants coordinate many metabolic pathways that simultaneously take place in young tea leaves in response to both developmental and environmental cues. With the available genome sequences of tea plants and high-throughput metabolomic tools as great platforms, it is of particular interest to launch metabolic genomics studies using tea plants as a model system. Plant metabolic genomics are to investigate all aspects of plant secondary metabolism at the genetic, genome, and molecular levels. This includes plant domestication and adaptation, divergence and convergence of secondary metaboloic pathways. The biosynthesis, transport, storage, and transcriptional regulation mechanisms of all metabolites are of core interest in the plant as a whole. This review highlights relevant contexts of metabolic genomics, outstanding questions, and strategies for answering them, with aim to guide future research for genetic improvement of nutrition quality for healthier plant foods.
TL;DR: The current state of art about antimicrobial molecules from marine bacteria has been summarized considering the main phylum and sources evolved in a marine environment, finding as most studied group of bacteria producers of substances with antimicrobial activity is the Firmicutes phylum.
Abstract: The marine environment encompasses a huge biological diversity and can be considered as an underexplored location for prospecting bioactive molecules. In this review, the current state of art about antimicrobial molecules from marine bacteria has been summarized considering the main phylum and sources evolved in a marine environment. Considering the last two decades, we have found as most studied group of bacteria producers of substances with antimicrobial activity is the Firmicutes phylum, in particular strains of the Bacillus genus. The reason for that can be attributed to the difficult cultivation of typical Actinobacteria from a marine sediment, whose members are the major producers of antimicrobial substances in land environments. However, a reversed trend has been observed in recent years with an increasing number of reports settling on Actinobacteria. Great diversity of chemical structures have been identified, such as fijimicyns and lynamicyns from Actinomycetes and macrolactins produced by Bacillus.
TL;DR: Their role in phytoremediation of heavy metal stress and whole genomic analysis based on an understanding of different metabolic pathways these endophytes utilize to combat stress is discussed.
Abstract: Endophytic microbes are present in nearly all of the plant species known to date but how they enter and flourish inside a host plant and display multiple benefits like plant growth promotion (PGP), biodegradation, and stress alleviation are still unexplored. Until now, the majority of the research has been conducted assuming that the host-endophyte interaction is analogous to the PGP microbes, although, studies related to the mechanisms of their infection, colonization as well as conferring important traits to the plants are limited. It would be fascinating to explore the role of these endophytic microbes in host gene expression, metabolism, and the modulation of phenotypic traits, under abiotic and biotic stress conditions. In this review, we critically focused on the following areas: (i) endophytic lifestyle and the mechanism of their entry into plant tissues, (ii) how endophytes modulate the immune system of plants and affect the genotypic and phenotypic expression of host plants under abiotic and biotic stress condition, and (iii) the role of omics and other integrated genomic approaches in unraveling complex host-endophyte signaling crosstalk. Furthermore, we discussed their role in phytoremediation of heavy metal stress and whole genomic analysis based on an understanding of different metabolic pathways these endophytes utilize to combat stress.
TL;DR: This review focuses on high-value compounds produced from diatoms, including chrysolaminarin (Chrl), eicosapentaenoic acid (EPA), and fucoxanthin (Fx), which can be applied in aquaculture, human health foods, pharmaceuticals, and cosmetics.
Abstract: Diatoms are unicellular photosynthetic microalgae existing ubiquitously in marine and freshwater environments. This review focuses on high-value compounds produced from diatoms, including chrysolaminarin (Chrl), eicosapentaenoic acid (EPA), and fucoxanthin (Fx), which can be applied in aquaculture, human health foods, pharmaceuticals, and cosmetics. In addition, this review provides an overview of their biosynthesis in diatoms and technologies for production. EPA and Fx typically accumulate synergistically in diatoms, while Chrl competes with EPA and Fx for carbon precursors. Several diatom strains have been employed that simultaneously accumulate these three compounds, but limitations and challenges still exist during commercialization. To address the bottleneck in biomass and high-value compound production, the optimization of cultivation parameters, the trophic mode, elicitor- or bacteria-assisted stimulations, and genetic modifications via mutant breeding, adaptive evolution engineering, and metabolic engineering have been developed in diatoms to establish improved technologies. Currently, large-scale cultivation of diatoms occurs mostly in open ponds and photobioreactors in autotrophic mode. Mixotrophic cultivation and coextraction approaches for multiple products represent novel strategies for economically enhancing the future production of biomass and high-value compounds on an industrial scale.
TL;DR: The conclusion is drawn that the study of the slurry rheology is very crucial in the designing of the mixing equipment, the shape and size of the digester, and the pipe transport system which can assist in minimizing the initial investment and operational costs.
Abstract: This paper is a critical evaluation of the effect of mixing on biogas production rates in an anaerobic digester. Mixing plays a prominent role in determining the efficiency of the anaerobic digestion process. This review analyzes the miscellaneous effects of mixing (on the microbial community, methane content and volatile fatty acids) at various mixing intensities and during different stages of the digestion process. Intermittent mixing (mixing at intervals) seems preferable in terms of the quality and quantity of biogas produced, and results in lower power consumption and maintenance costs associated with large-scale biogas production. Preferable mixing time (the length at intervals) and the intensity depends on the geometry of the digester and impeller.The conclusion is drawn that the study of the slurry rheology is very crucial in the designing of the mixing equipment, the shape and size of the digester, and the pipe transport system which can assist in minimizing the initial investment and operational costs. Accordingly, this paper focuses on the parameters which determine the potency of mixing, such as viscosity, total solid content and digester design. Empirical data demonstrated by various researchers regarding rheological characteristics is compared and reviewed. Consequently, close attention should be paid toward the optimization of mixing in terms of its speed, mixing time and impeller geometry, especially during different stages of the digestion process (hydrolysis, acidogenesis, acetogenesis and methanogenesis). Finally, readers will be guided to the extensive publications regarding optimization, directions of future research, and troubleshooting of the mixing operation in an anaerobic digester. This investigation will help to improve mixing efficiency with biogas plants.HighlightsEffect of shear rate on different stages of an anaerobic digestion process.Methane content varies with the variation in mixing speeds.Mixing effect is significant when the total solid content is higher.Intermittent mixing is favorable when compared to continuous mixing.The geometry of the digester and mixer is essential to evaluate digester mixing.
TL;DR: This review discusses the currently used methodologies regarding traditional and engineered exosome loading and targeting techniques and focuses on the advantages and disadvantages of each method while discussing some results obtained in relevant reports.
Abstract: Exosomes are a subpopulation of cell membrane-derived vesicles which play an essential role in cellular communication. In recent years, several studies have exploited the natural properties of exosomes as nanocarriers for several applications such as immunotherapy or drug delivery. Consequently, numerous techniques have been developed to improve their immunogenicity, drug loading efficiency, or targeting. Nonetheless, to date, there is no consensus on which technique results in more advantages for this purpose. In this context, this review discusses the currently used methodologies regarding traditional and engineered exosome loading and targeting techniques. Here, we focus on the advantages and disadvantages of each method while discussing some results obtained in relevant reports. Although there is a lack of evidence regarding the effects of exogenous exosomes in humans and several limitations in exosome isolation and purification techniques at the large-scale exist, the formulation of new exosome-based therapeutics is in the spotlight. Therefore, the development of more efficient functionalization techniques is required to reduce the potential risks associated with the clinical use of these vesicles.
TL;DR: The state-of-the art of biosorption technology applying magnetically immobilized cells is presented in this review and provides insights into this research area.
Abstract: Biosorption processes emerge as an economical and eco-friendly alternative technology for the removal of pollutants present in the environment. One biosorption process application is found in the immobilization of microbial cells for the removal of toxic pollutants in industrial wastewater. The immobilization of microorganisms on magnetic nano-based carriers is a relevant new technique applied to obtain biocatalysts for environmental pollution control, however, it has been little described in the literature. Magnetic nanoparticles present several advantages when compared to suspended microorganism technology and conventional methods of cell immobilization, such as simple recovery of catalysts from the liquid phase. Considering the relevant application of magnetic nanoparticles as a support for microorganism immobilization, this review aims to present potential studies in the immobilization of bacteria, yeast, and fungi on magnetic nano-based carriers. Immobilization carriers and methods are highlighted and discussed based on their strengths and drawbacks. Isotherm and kinetic models are presented. This review also highlights the application of immobilized microbial nanoparticles in the removal of heavy metals from the environment. The state-of-the art of biosorption technology applying magnetically immobilized cells is presented in this review and provides insights into this research area.
TL;DR: In this review, the knowledge about NPs application to induce plant growth is summarized to direct future studies in order to propose NPs for technological innovation.
Abstract: Nanotechnology has been proposed as an important tool and strategy for applying new products in agriculture at the nanometer scale in order to improve the food crop at sustainability and productivity levels for contributing with the agriculture security. Nanoparticles (NPs) have been planted as an intelligent material with a large contact surface per unit mass respect to bulk-products, allowing its effect to be exerted with greater efficiency in a specific point on a plant target. Currently, NPs have been studied to be applied to various species of monocotyledonous and dicotyledonous plants. Some NPs properties such as concentration, shape, size, composition and surface functionality have the ability to regulate the NPs growth effects on the plant during germination and seedling stages under controlled and field conditions. Furthermore, several studies have tried to explain the mechanism of uptake, translocation and accumulation of NPs inside the plant at the organ and cell level, but further studies are needed to determine specific mechanisms and exact action. Nevertheless, evaluation of the toxicity effects of NPs on physiological indexes of the plant is needed to determine the effective dose without producing adverse effects on the plant and food chain. It is noteworthy that studies have indicated that nanoparticles, regardless of their nature, can be efficient inducers of plant growth. However, a series of laboratory tests are required to optimize their application conditions and their specific physiological impact on plants. In this review, we summarize the knowledge about NPs application to induce plant growth to direct future studies in order to propose NPs for technological innovation.
TL;DR: The discussion highlights the sustainability improvement, achieved by the conversion from a submerged technology to a solid-state fermentation (koji process) and the possibility to use waste substrates represents one of the main options considered in the recent patents.
Abstract: Citric acid is considered one of the most valuable weak organic acids on the market and its production by biotechnological approaches is a very interesting topic. Despite the related scientific research, the literature still lacks a state of the art for the technological innovation change, necessary for a study of the inventions designed for real scale implementation. In this context, the present review looks to account for more than 100 worldwide patents (1929-2018), necessary for the identification of the innovative markets and the most promising fields for economic investments. This deepened study identified an increasing invention number, combined with the current worldwide citric acid export flows, with China as the leader (with an economic contribution of 75%, in 2017). In order to satisfy the requests of the market which has moved toward a circular economy, the possibility to use waste substrates represents one of the main options considered in the recent patents. The discussion highlights the sustainability improvement, achieved by the conversion from a submerged technology to a solid-state fermentation (koji process). The listed results are essential for both a scientific audience and the stakeholders involved in citric acid production, in order to have a complete and updated overview of this topic.
TL;DR: The focus of this review is to present the state-of-the-art of all aspects of the investigations into the bacterial transformations of selenium species, and to consider the characterization and biotechnological uses of these transformations and their products.
Abstract: Microbial bio-transformations of the essential trace element selenium are now recognized to occur among a wide variety of microorganisms. These transformations are used to convert this element into its assimilated form of selenocysteine, which is at the active center of a number of key enzymes, and to produce selenium nanoparticles, quantum dots, metal selenides, and methylated selenium species that are indispensable for biotechnological and bioremediation applications. The focus of this review is to present the state-of-the-art of all aspects of the investigations into the bacterial transformations of selenium species, and to consider the characterization and biotechnological uses of these transformations and their products.
TL;DR: This review provides an overview of the basic concepts, mechanisms, advantages, problems, and trends in MEOR, and demonstrates the credibility of MEOR methods for applications in enhanced heavy oil recovery and the petroleum refining processes.
Abstract: Heavy oil accounts for around one-third of total global oil and gas resources. The progressive depletion of conventional energy reserves has led to an increased emphasis on the efficient exploitati...
TL;DR: The present review highlights the recent advances in the biotechnological production of erythritol and mannitol and summarizes the benefits of using the two polyols in the food and pharmaceutical industries.
Abstract: Dietary habits that include an excess of added sugars have been strongly associated with an increased risk of obesity, heart disease, diabetes, and tooth decay. With this association in view, modern food systems aim to replace added sugars with low calorie sweeteners, such as polyols. Polyols are generally not carcinogenic and do not trigger a glycemic response. Furthermore, owing to the absence of the carbonyl group, they are more stable compared to monosaccharides and do not participate in Maillard reactions. As such, since polyols are stable at high temperatures, and they do not brown or caramelize when heated. Therefore, polyols are widely used in the diets of hypocaloric and diabetic patients, as well as other specific cases where controlled caloric intake is required. In recent years, erythritol and mannitol have gained increased importance, especially in the food and pharmaceutical industries. In these areas, research efforts have been made to improve the productivity and yield of the two polyols, relying on biotechnological manufacturing methods. The present review highlights the recent advances in the biotechnological production of erythritol and mannitol and summarizes the benefits of using the two polyols in the food and pharmaceutical industries.
TL;DR: This review critically discussed the different strategies for the priority-based multiple products by implementation of the advanced techniques of cell disruption and biomass fractionation from microalgal biomass.
Abstract: Microalgal biomass is composed of different valuable metabolites that can satisfy the requirements of renewable biofuels, alternative proteins, carbohydrates, and food grade natural colorants. Production of a specific product from microalgae has been proved to be economically infeasible on the commercial scale except for the production of high-value products (e.g. carotenoids and phycobiliproteins). Therefore, the simultaneous extraction of multiple products is essential to bring pragmatism for the production of biofuels, proteins, and carbohydrate derived products from microalgal biomass. In order to obtain multiple products, various strategies have been implemented using potential techniques of cell disruption and biomass fractionation based on the priorities of products. Conventional approaches of downstream processing have often proved to be inefficient in the case of integrated fractionation systems. This is attributable to the divergent nature of the intracellular metabolites of microalgae and their vulnerability toward the different chemicals and conditions of those downstream processes. However, three phase partitioning (TPP), aqueous two-phase separation, membrane separation, supercritical fluid extraction (SFE), and pressurized liquid extraction (PLE) are some of the advanced techniques which have been proved to be useful in this regard. Choice of cell disruption mechanisms is critical for several purposes, such as the selective release of metabolites into a suitable solvent, preservation of bioactivity of molecules and cost-savings. Unfortunately, consolidated report for the fractionation of priority-based products from microalgal biomass using these techniques is lacking. Therefore, in this review, we have critically discussed the different strategies for the priority-based multiple products by implementation of the advanced techniques.
TL;DR: This article highlights the inherent properties of the fungus to degrade various biopolymers as well as its relative safety for human use, which have raised the possibilities of exploitation for industrial production and as safe hosts for gene expression.
Abstract: Beauveria bassiana though widely perceived as an entomopathogenic fungus has also been found in nature to be endophytic. As entomopathogens, the life cycle of different B. bassiana strains are organized and adapted as pathogens to their invertebrate hosts while as endophytes they maintain a symbiotic relationship with their plant hosts. To fulfill these aforementioned ecological roles, this fungus secretes an array of enzymes as well as secondary metabolites, which all have significant biological roles. Basically, chitinases, lipases and proteases are considered to be the most important of all the enzymes produced by B. bassiana. However, studies have also shown their ability to produce other vital enzymes which include amylase, asparaginase, cellulase, galactosidase etc. Previous reports on this filamentous fungus have laid more emphasis on its entomopathogenicity, its endophytism and its highly acclaimed application in the biological control of pests. This review, however, is the first to fully assess the enzyme-secreting potential of this entomopathogenic fungus and its use as a novel source of several industrial biocatalysts and other important biochemicals. This article highlights the inherent properties of the fungus to degrade various biopolymers as well as its relative safety for human use. Some of the important factors have raised the possibilities of exploitation for industrial production and as safe hosts for gene expression.
TL;DR: The meticulous description regarding the choice of transducers and the significant role of mediators in a high response biosensor has been reviewed and the utilization of highly attractive electrolytic characteristics of nanoparticles to enhance the specificity and accuracy of BA biosensors is included.
Abstract: The present review emphasizes on the quantification of biogenic amines (BAs) which are regarded as a quality indicator of food freshness or spoilage and for evaluating microbial action while food processing. BAs have various potential adverse effects on human health and they are widely found in varying concentrations in different food stuffs. In the quest for a reliable method for their precise detection, BA biosensors have emerged as an efficient tool which enables rapid and accurate assessment in miniature form. Various combinations of amine oxidase enzymes have been used for the fabrication of biosensors in order to enhance specific biorecognition and signal transduction. This article also summarizes the widely employed components used in the construction of a pertinent biosensor and the research results conducted previously. The meticulous description regarding the choice of transducers and the significant role of mediators in a high response biosensor has been reviewed. Moreover, it also encompasses the utilization of highly attractive electrolytic characteristics of nanoparticles to enhance the specificity and accuracy of BA biosensors.
TL;DR: This review aims to project a rapid developmental path showing a broad vision of recent biotechnologies, applications, challenges, and opportunities for scholars inBiotechnological fields for “green” wastewater treatment.
Abstract: The importance of highly efficient wastewater treatment is evident from aggravated water crises. With the development of green technology, wastewater treatment is required in an eco-friendly manner. Biotechnology is a promising solution to address this problem, including treatment and monitoring processes. The main directions and differences in biotreatment process are related to the surrounding environmental conditions, biological processes, and the type of microorganisms. It is significant to find suitable biotreatment methods to meet the specific requirements for practical situations. In this review, we first provide a comprehensive overview of optimized biotreatment processes for treating wastewater during different conditions. Both the advantages and disadvantages of these biotechnologies are discussed at length, along with their application scope. Then, we elaborated on recent developments of advanced biosensors (i.e. optical, electrochemical, and other biosensors) for monitoring processes. Finally, we discuss the limitations and perspectives of biological methods and biosensors applied in wastewater treatment. Overall, this review aims to project a rapid developmental path showing a broad vision of recent biotechnologies, applications, challenges, and opportunities for scholars in biotechnological fields for "green" wastewater treatment.
TL;DR: An overview and evaluation of various reports on crosstalk or overlapping hormonal responses from individual stress studies and how the combination of drought and pathogen infection modulates hormone levels and their associated signaling pathways in plant responses to these combined stresses is provided.
Abstract: Plants exposed to the combination of drought and pathogen infections are in a unique state, different from that of plants exposed to each stress alone. Plants undergo major hormonal changes during drought and/or pathogen infection, highlighting the importance of hormones as crucial mediators of plant stress responses. Evidence from individual stress studies has shown that drought and pathogen infection have both different and overlapping impacts on hormone metabolism and hormone-associated signal transduction pathways. Thus, under the combination of drought and pathogen infection, a reprograming of hormone levels and related signaling networks is inevitable. This process delivers data from plants exposed to individual stressors inadequate for predicting how hormone levels and related signaling networks will change in plants exposed to a combination of stressors. Furthermore, the yield of crop plants, determined by their capacity for stress acclimatization and resistance to pathogen infection, will be underpinned by interactions among the hormone pathways. Although many studies have been conducted to understand the molecular mechanisms associated with plant responses to combinations of stressors, the interactions that occur among hormones are far from being well-understood. We provide here an overview and evaluation of various reports on crosstalk or overlapping hormonal responses from individual stress studies and how the combination of drought and pathogen infection modulates hormone levels and their associated signaling pathways in plant responses to these combined stresses. We also give a brief overview of the importance of overlapping plant responses for the production of crop plants resistant to individual and combined stressors under natural environmental conditions.
TL;DR: An overview of properties, applications, and perspectives for encouraging further projects and investments in the near future by most categories of investors is presented.
Abstract: Fungal biopolymers have gained considerable attention from the scientific community for various applications due to their biological and physicochemical properties. The wide applications in several areas, especially in the food industry as a bioemulsifier and in the agricultural area as a biosurfactant, have expanded the knowledge on the production of fungal biopolymers to keep up with developments on this subject area. Recent scientific studies have disclosed novel routes, optimized parameters, increased yields, and other related approaches in order to produce and apply fungal bioemulsifiers and biosurfactants. However, there is a need to gather important information in order to provide a way forward. Therefore, this review presents an overview of properties, applications, and perspectives for encouraging further projects and investments in the near future by most categories of investors. The selection of culture media, the definition of cultivation parameters, extraction, recovery, and purification are the initial steps to indicate the conditions for scale-up. Indeed, scale-up is still one of the challenges in this biotechnological field, which could be solved by expanding the tests and operational productions in both pilot and industrial plants.
TL;DR: Some strategies used by bacteria to inhibit phage infections as well as phage tactics to circumvent bacterial defense systems are discussed in this review.
Abstract: Since the dawn of life, bacteria and phages are locked in a constant battle and both are perpetually changing their tactics to overcome each other. Bacteria use various strategies to overco...
TL;DR: A view of new aspects of the application of solid-phase denitrification for water remediation, including the processes and mechanisms for nitrogen transformation in SPD, and some novel measures to mitigate these limitations.
Abstract: Nitrate pollution in water environments is a ubiquitous problem. Solid-phase denitrification (SPD) is a technology that has attracted in recent years increasing attention due to its significant adv...