scispace - formally typeset
Open AccessJournal ArticleDOI

An electrophoretic karyotype for yeast

Georges F. Carle, +1 more
- 01 Jun 1985 - 
- Vol. 82, Iss: 11, pp 3756-3760
Reads0
Chats0
TLDR
With the possible exception of chromosomes that differ greatly in size or electrophoretic behavior from all the known chromosomes, the results appear to define a complete "electrophoretics karyotype" for yeast.
Abstract
The chromosomal DNA molecules of a standard laboratory strain of Saccharomyces cerevisiae have been separated into 12 well-resolved bands by orthogonal-field-alternation gel electrophoresis. DNA X DNA hybridization probes derived from cloned genes have been used to correlate this banding pattern with yeast's genetically defined chromosomes. The 12 bands are shown to represent 9 singlets and 3 comigrating doublets, thereby accounting for 15 chromosomes that were identified as I-XI and XIII-XVI. Because the three comigrating doublets could be readily resolved in certain laboratory yeast strains that contain chromosome-length polymorphisms relative to our standard strain, all 15 of these chromosomes could be displayed as a single band in at least one of four strains that were studied. A 16th chromosome (number XII), which is known to contain the genes for rRNA, does not reproducibly enter the gels. By making use of the band identifications, the previously unmapped fragment F8 was assigned to chromosome XIII. With the possible exception of chromosomes that differ greatly in size or electrophoretic behavior from all the known chromosomes, the results appear to define a complete "electrophoretic karyotype" for yeast.

read more

Citations
More filters
Journal ArticleDOI

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

TL;DR: Two small lin-4 transcripts of approximately 22 and 61 nt were identified in C. elegans and found to contain sequences complementary to a repeated sequence element in the 3' untranslated region (UTR) of lin-14 mRNA, suggesting that lin- 4 regulates lin- 14 translation via an antisense RNA-RNA interaction.
Journal ArticleDOI

Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors

TL;DR: By offering a tenfold increase in the size of the DNA molecules that can be cloned into a microbial host, this system addresses a major gap in existing experimental methods for analyzing complex DNA sources.
Journal ArticleDOI

Separation of large DNA molecules by contour-clamped homogeneous electric fields

TL;DR: Electric fields can be manipulated by a method in which multiple electrodes are arranged along a closed contour and clamped to predetermined electric potentials and the pattern of separation is independent of position in the gel, which is an advantage over previous methods.
Journal ArticleDOI

The TRANSPARENT TESTA GLABRA1 Locus, Which Regulates Trichome Differentiation and Anthocyanin Biosynthesis in Arabidopsis, Encodes a WD40 Repeat Protein

TL;DR: The TRANSPARENT TESTA GLABRA1 (TTG1) locus regulates several developmental and biochemical pathways in Arabidopsis, including the formation of hairs on leaves, stems, and roots, and the production of seed mucilage and anthocyanin pigments.
Journal ArticleDOI

Electrophoretic separations of large DNA molecules by periodic inversion of the electric field

TL;DR: Tuning the frequency of the field inversions from 10 to 0.01 hertz, makes it possible to resolve selectively DNA's in the size range 15 to greater than 700 kilobase pairs.
References
More filters
Journal ArticleDOI

Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis

TL;DR: This pulsed field gradient gel electrophoresis fractionates intact S. cerevisiae chromosomal DNA, producing a molecular karyotype that greatly facilitates the assignment of genes to yeast chromosomes.
Journal ArticleDOI

Separation of chromosomal DNA molecules from yeast by orthogonal-field-alternation gel electrophoresis

TL;DR: The design of the apparatus, the electrophoretic protocol, and the sample-handling procedures that are employed are described, and several of which have been shown by DNA-DNA hybridization to hybridize uniquely to different chromosome-specific hybridization probes are described.
Journal ArticleDOI

Macromolecule Synthesis in Temperature-sensitive Mutants of Yeast

TL;DR: The mutants were tested for loss of viability, change in morphology, increase in cell number, and ability to synthesize protein, ribonucleic acid (RNA), and deoxyribonuclear acid (DNA) after a shift from 23 to 36 C as mentioned in this paper.
Journal ArticleDOI

The petite mutation in yeast. Loss of mitochondrial deoxyribonucleic acid during induction of petites with ethidium bromide.

TL;DR: The mechanism of this conversion in Saccharomyces cerevisiae is investigated by examining the properties of mitochondrial DNA at various times during the mutation process, using cycloheximide to amplify the proportion of radioactivity in mitochondrial DNA.
Journal ArticleDOI

Genetic map of Saccharomyces cerevisiae.

R K Mortimer, +1 more
TL;DR: Although all of the data presented in this article are from tetrad analyses, many other techniques have been used to assign genes to chromosomes or to specific chromosome arms, including aneuploid analysis, mitotic recombination analysis,Mitotic chromosome loss or nondisjunction, and random spore analysis.
Related Papers (5)