Archaea catalyze iron-dependent anaerobic oxidation of methane
TLDR
This study identifies archaea of the order Methanosarcinales, related to “Candidatus Methanoperedens nitroreducens,” which couple the reduction of environmentally relevant particulate forms of iron and manganese to methane oxidation, filling one of the remaining lacunas in anaerobic methane oxidation.Abstract:
Anaerobic oxidation of methane (AOM) is crucial for controlling the emission of this potent greenhouse gas to the atmosphere. Nitrite-, nitrate-, and sulfate-dependent methane oxidation is well-documented, but AOM coupled to the reduction of oxidized metals has so far been demonstrated only in environmental samples. Here, using a freshwater enrichment culture, we show that archaea of the order Methanosarcinales, related to “Candidatus Methanoperedens nitroreducens,” couple the reduction of environmentally relevant forms of Fe^(3+) and Mn^(4+) to the oxidation of methane. We obtained an enrichment culture of these archaea under anaerobic, nitrate-reducing conditions with a continuous supply of methane. Via batch incubations using [^(13)C]methane, we demonstrated that soluble ferric iron (Fe^(3+), as Fe-citrate) and nanoparticulate forms of Fe^(3+) and Mn^(4+) supported methane-oxidizing activity. CO_2 and ferrous iron (Fe^(2+)) were produced in stoichiometric amounts. Our study connects the previous finding of iron-dependent AOM to microorganisms detected in numerous habitats worldwide. Consequently, it enables a better understanding of the interaction between the biogeochemical cycles of iron and methane.read more
Citations
More filters
Journal ArticleDOI
The microbial nitrogen-cycling network
TL;DR: This Review summarizes the current understanding of the microbial nitrogen-cycling network, including novel processes, their underlying biochemical pathways, the involved microorganisms, their environmental importance and industrial applications.
Journal ArticleDOI
Syntrophy Goes Electric: Direct Interspecies Electron Transfer
TL;DR: The finding that DIET can serve as the source of electrons for anaerobic photosynthesis further broadens its potential environmental significance.
Journal ArticleDOI
Methane Feedbacks to the Global Climate System in a Warmer World
Joshua F. Dean,Jack J. Middelburg,Thomas Röckmann,Rien Aerts,Luke G. Blauw,Matthias Egger,Mike S. M. Jetten,Anniek E. E. de Jong,Ove H. Meisel,Olivia Rasigraf,Caroline P. Slomp,Michiel H. in 't Zandt,A. J. Dolman +12 more
TL;DR: In this article, the authors synthesize biological, geochemical, and physically focused CH4 climate feedback literature, bringing together the key findings of these disciplines, and discuss environment-specific feedback processes, including the microbial, physical, and geochemical interlinkages and the timescales on which they operate.
Journal ArticleDOI
An evolving view of methane metabolism in the Archaea.
Paul N. Evans,Joel A. Boyd,Andy O. Leu,Ben J. Woodcroft,Donovan H. Parks,Philip Hugenholtz,Gene W. Tyson +6 more
TL;DR: This Review examines the diversity, metabolism and evolutionary history of mcr-containing archaea in new euryarchaeotal lineages and novel archaeal phyla and highlights the evolutionary relationships of key enzymes with recently discovered alkane-oxidizing archaea.
Journal ArticleDOI
Iron formations: A global record of Neoarchaean to Palaeoproterozoic environmental history
Kurt O. Konhauser,Noah J. Planavsky,Noah J. Planavsky,Dalton S. Hardisty,Leslie J. Robbins,Tyler J. Warchola,Rasmus Haugaard,Rasmus Haugaard,Stefan V. Lalonde,Camille A. Partin,Paul B.H. Oonk,Harilaos Tsikos,Timothy W. Lyons,Timothy W. Lyons,Andrey Bekker,Clark M. Johnson,Clark M. Johnson +16 more
TL;DR: A review of the defining features of iron formations and their distribution through the Neo-archaean and Palaeoproterozoic is presented in this article, along with an update of previous reviews by Bekker et al. (2010, 2014).
References
More filters
Journal ArticleDOI
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
TL;DR: An advanced version of the Molecular Evolutionary Genetics Analysis software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis, is released, which enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny.
Brief Communication MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
TL;DR: The Molecular Evolutionary Genetics Analysis (MEGA) software as discussed by the authors provides facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis, including the inference of timetrees.
Journal ArticleDOI
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes
TL;DR: A new membrane protein topology prediction method, TMHMM, based on a hidden Markov model is described and validated, and it is discovered that proteins with N(in)-C(in) topologies are strongly preferred in all examined organisms, except Caenorhabditis elegans, where the large number of 7TM receptors increases the counts for N(out)-C-in topologies.
Journal ArticleDOI
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
Katharina F. Ettwig,Margaret K. Butler,Margaret K. Butler,Denis Le Paslier,Denis Le Paslier,Eric Pelletier,Eric Pelletier,Sophie Mangenot,Marcel M. M. Kuypers,Frank Schreiber,Bas E. Dutilh,Johannes Zedelius,Dirk de Beer,Jolein Gloerich,Hans J. C. T. Wessels,Theo A. van Alen,Francisca A. Luesken,Ming L. Wu,Katinka T. van de Pas-Schoonen,Huub J. M. Op den Camp,Eva M. Janssen-Megens,Kees-Jan Francoijs,Henk Stunnenberg,Jean Weissenbach,Jean Weissenbach,Mike S. M. Jetten,Marc Strous,Marc Strous +27 more
TL;DR: Evidence for a fourth pathway to produce oxygen is presented, possibly of considerable geochemical and evolutionary importance, and opens up the possibility that oxygen was available to microbial metabolism before the evolution of oxygenic photosynthesis.
Related Papers (5)
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
Katharina F. Ettwig,Margaret K. Butler,Margaret K. Butler,Denis Le Paslier,Denis Le Paslier,Eric Pelletier,Eric Pelletier,Sophie Mangenot,Marcel M. M. Kuypers,Frank Schreiber,Bas E. Dutilh,Johannes Zedelius,Dirk de Beer,Jolein Gloerich,Hans J. C. T. Wessels,Theo A. van Alen,Francisca A. Luesken,Ming L. Wu,Katinka T. van de Pas-Schoonen,Huub J. M. Op den Camp,Eva M. Janssen-Megens,Kees-Jan Francoijs,Henk Stunnenberg,Jean Weissenbach,Jean Weissenbach,Mike S. M. Jetten,Marc Strous,Marc Strous +27 more
Manganese- and Iron-Dependent Marine Methane Oxidation
Anaerobic Oxidation of Methane: Progress with an Unknown Process
Katrin Knittel,Antje Boetius +1 more