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Open AccessJournal ArticleDOI

Binding of the La autoantigen to the hepatitis C virus 3′ untranslated region protects the RNA from rapid degradation in vitro

Karin Spångberg, +2 more
- 01 Jan 2001 - 
- Vol. 82, Iss: 1, pp 113-120
TLDR
It is found that the 3' end of positive polarity HCV RNA is sensitive to cytosolic RNases whereas the 3', untranslated region with the cellular La protein prevented premature degradation of the HCV RNAs.
Abstract
We have analysed hepatitis C virus (HCV) RNAs in an in vitro RNA degradation assay. We found that the 3′ end of positive polarity HCV RNA is sensitive to cytosolic RNases whereas the 3′ end of negative polarity HCV RNA is relatively stable. Interaction of the HCV 3′ untranslated region with the cellular La protein prevented premature degradation of the HCV RNA. One may speculate that HCV RNAs interact with La protein in infected cells to prevent premature degradation of the viral RNAs.

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Citations
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Journal ArticleDOI

The la protein

TL;DR: This review focuses on the roles of the Laprotein in small RNA biogenesis and also discusses data that implicate the La protein in the translation of specific mRNAs.
Journal ArticleDOI

Genetic Analysis of Sequences in the 3′ Nontranslated Region of Hepatitis C Virus That Are Important for RNA Replication

TL;DR: These data represent the first detailed mapping of sequences in the 3′ NTR assumed to act as a promoter for initiation of minus-strand RNA synthesis and demonstrate that this region is most crucial for efficient RNA replication.
Journal ArticleDOI

A cis-Acting Replication Element in the Sequence Encoding the NS5B RNA-Dependent RNA Polymerase Is Required for Hepatitis C Virus RNA Replication

TL;DR: Understanding the role of 5BSL3.2 and determining how this new CRE functions in the context of previously identified elements at the 5′ and 3′ ends of the RNA genome should provide new insights into HCV RNA replication.
Journal ArticleDOI

Translation Elongation Factor-1α, La, and PTB Interact with the 3′ Untranslated Region of Dengue 4 Virus RNA

TL;DR: The specific binding of La and PTB to the sequences considered essential for viral RNA replication may suggest that these proteins could function as RNA chaperones to maintain RNA structure in a conformation that favors viral replication, while EF-1alpha may function as an RNA helicase.
Journal ArticleDOI

La autoantigen is necessary for optimal function of the poliovirus and hepatitis C virus internal ribosome entry site in vivo and in vitro.

TL;DR: It is demonstrated that depletion of La causes a dramatic reduction in poliovirus IRES function in vivo and a function of the La autoantigen in IRES-dependent translation is provided, which is defined as the step of translation which is stimulated by La.
References
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Journal ArticleDOI

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TL;DR: A procedure for preparing extracts from nuclei of human tissue culture cells that directs accurate transcription initiation in vitro from class II promoters, including tRNA and Ad 2 VA, is developed.
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TL;DR: This review concerns how cytoplasmic mRNA half-lives are regulated and how mRNA decay rates influence gene expression and techniques for measuring eukaryotic mRNA stability and for calculating decay constants.
Journal ArticleDOI

The Exosome: A Conserved Eukaryotic RNA Processing Complex Containing Multiple 3′→5′ Exoribonucleases

TL;DR: The exosome constitutes a highly conserved eukaryotic RNA processing complex in S. cerevisiae that is required for 3' processing of the 5.8S rRNA.
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Starting at the Beginning, Middle, and End: Translation Initiation in Eukaryotes

TL;DR: In this model, the cap structure and the IRES element have identical functions in the translation process: they assist in recruitment of the 40S subunit to the mRNA, and they provide a loading site for40S subunits at a unique position on the mRNA.
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The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex

TL;DR: It is argued that efficient mRNA turnover is required for viability and that the two major pathways of mRNA decay in yeast are identified, and the exosome's activity on mRNAs may be modulated by Ski2p, Ski3p and Ski8p.
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