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Blood oxygenation level-dependent (BOLD)-based techniques for the quantification of brain hemodynamic and metabolic properties - theoretical models and experimental approaches.

TLDR
Both scientists just entering the MR field and more experienced MR researchers interested in the application of advanced BOLD‐based techniques to the study of the brain in health and disease are targeted.
Abstract
The quantitative evaluation of brain hemodynamics and metabolism, particularly the relationship between brain function and oxygen utilization, is important for the understanding of normal human brain operation, as well as the pathophysiology of neurological disorders. It can also be of great importance for the evaluation of hypoxia within tumors of the brain and other organs. A fundamental discovery by Ogawa and coworkers of the blood oxygenation level-dependent (BOLD) contrast opened up the possibility to use this effect to study brain hemodynamic and metabolic properties by means of MRI measurements. Such measurements require the development of theoretical models connecting the MRI signal to brain structure and function, and the design of experimental techniques allowing MR measurements to be made of the salient features of theoretical models. In this review, we discuss several such theoretical models and experimental methods for the quantification of brain hemodynamic and metabolic properties. The review's main focus is on methods for the evaluation of the oxygen extraction fraction (OEF) based on the measurement of the blood oxygenation level. A combination of the measurement of OEF and the cerebral blood flow (CBF) allows an evaluation to be made of the cerebral metabolic rate of oxygen consumption (CMRO2 ). We first consider in detail the magnetic properties of blood - magnetic susceptibility, MR relaxation and theoretical models of the intravascular contribution to the MR signal under different experimental conditions. We then describe a 'through-space' effect - the influence of inhomogeneous magnetic fields, created in the extravascular space by intravascular deoxygenated blood, on the formation of the MR signal. Further, we describe several experimental techniques taking advantage of these theoretical models. Some of these techniques - MR susceptometry and T2 -based quantification of OEF - utilize the intravascular MR signal. Another technique - quantitative BOLD - evaluates OEF by making use of through-space effects. In this review, we target both scientists just entering the MR field and more experienced MR researchers interested in the application of advanced BOLD-based techniques to the study of the brain in health and disease.

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Journal ArticleDOI

The physics of functional magnetic resonance imaging (fMRI)

TL;DR: The current challenge for fMRI is to move fMRI from a mapping tool to a quantitative probe of brain physiology, in which other MRI methods are combined with BOLD methods and analyzed within a theoretical modeling framework to derive quantitative estimates of oxygen metabolism and other physiological variables.
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Oxygen-Sensing Methods in Biomedicine from the Macroscale to the Microscale.

TL;DR: The most significant recent advances in the development of oxygen-sensing materials and techniques, including polarographic, nuclear medicine, magnetic resonance, and optical approaches, that can be applied specifically for the real-time monitoring of oxygen dynamics in cellular and tissue environments are presented.
Journal ArticleDOI

Background, current role, and potential applications of radiogenomics.

TL;DR: Radiogenomics aims to correlate imaging characteristics with gene expression patterns, gene mutations, and other genome‐related characteristics and is designed to facilitate a deeper understanding of tumor biology and capture the intrinsic tumor heterogeneity.
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Voxel spread function method for correction of magnetic field inhomogeneity effects in quantitative gradient‐echo‐based MRI

TL;DR: The goal of this article is to develop a method for correction of macroscopic field inhomogeneities that can be applied to a variety of quantitative gradient‐echo‐based MRI techniques.
Journal ArticleDOI

Assessing Tumor Oxygenation for Predicting Outcome in Radiation Oncology: A Review of Studies Correlating Tumor Hypoxic Status and Outcome in the Preclinical and Clinical Settings.

TL;DR: Non-invasive methods dedicated to assessing tumor oxygenation with the ultimate goal of predicting outcome in radiation oncology are presented, including positron emission tomography used with nitroimidazole tracers, magnetic resonance methods using endogenous contrasts, and electron paramagnetic resonance oximetry.
References
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A table of integrals

TL;DR: Basic Forms x n dx = 1 n + 1 x n+1 (1) 1 x dx = ln |x| (2) udv = uv − vdu (3) 1 ax + bdx = 1 a ln|ax + b| (4) Integrals of Rational Functions
Journal ArticleDOI

A default mode of brain function.

TL;DR: A baseline state of the normal adult human brain in terms of the brain oxygen extraction fraction or OEF is identified, suggesting the existence of an organized, baseline default mode of brain function that is suspended during specific goal-directed behaviors.
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Brain magnetic resonance imaging with contrast dependent on blood oxygenation

TL;DR: In this paper, the authors demonstrate in vivo images of brain microvasculature with image contrast reflecting the blood oxygen level, which can be used to provide in vivo real-time maps of blood oxygenation in the brain under normal physiological conditions.
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Effects of Diffusion on Free Precession in Nuclear Magnetic Resonance Experiments

TL;DR: In this paper, the effect of diffusion on free precession in nuclear resonance has been studied, and a new scheme for measuring the transverse relaxation time is described, which largely circumvents the diffusion effect.
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