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Open AccessJournal ArticleDOI

Constructing, conducting and interpreting animal social network analysis

TLDR
The under‐exploited potential of experimental manipulations on social networks to address research questions is highlighted, and an overview of methods for quantifying properties of nodes and networks, as well as for testing hypotheses concerning network structure and network processes are provided.
Abstract
Summary Animal social networks are descriptions of social structure which, aside from their intrinsic interest for understanding sociality, can have significant bearing across many fields of biology. Network analysis provides a flexible toolbox for testing a broad range of hypotheses, and for describing the social system of species or populations in a quantitative and comparable manner. However, it requires careful consideration of underlying assumptions, in particular differentiating real from observed networks and controlling for inherent biases that are common in social data. We provide a practical guide for using this framework to analyse animal social systems and test hypotheses. First, we discuss key considerations when defining nodes and edges, and when designing methods for collecting data. We discuss different approaches for inferring social networks from these data and displaying them. We then provide an overview of methods for quantifying properties of nodes and networks, as well as for testing hypotheses concerning network structure and network processes. Finally, we provide information about assessing the power and accuracy of an observed network. Alongside this manuscript, we provide appendices containing background information on common programming routines and worked examples of how to perform network analysis using the r programming language. We conclude by discussing some of the major current challenges in social network analysis and interesting future directions. In particular, we highlight the under-exploited potential of experimental manipulations on social networks to address research questions.

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Journal ArticleDOI

A guide to null models for animal social network analysis.

TL;DR: It is shown that permutations of the raw observational (or ‘pre‐network’) data consistently account for underlying structure in the generated social network, and thus can reduce both type I and type II error rates.
Journal ArticleDOI

Social determinants of health and survival in humans and other animals

TL;DR: These findings suggest that some aspects of the social determinants of health—especially those that can be modeled through studies of direct social interaction in nonhuman animals—have deep evolutionary roots and present new opportunities for studying the emergence of social disparities in health and mortality risk.
Journal ArticleDOI

A framework for studying social complexity

TL;DR: This paper critically review definitions and studies of social complexity in invertebrate and vertebrate societies, arguing that the concept is being used inconsistently in studies of vertebrate sociality.
Journal ArticleDOI

Emerging Network-Based Tools in Movement Ecology.

TL;DR: It is suggested that network theory can be used to model and predict the influence of ecological and environmental parameters on animal movement, focusing on spatial and social connectivity, with fundamental implications for conservation.
Journal ArticleDOI

Chimpanzee face recognition from videos in the wild using deep learning

TL;DR: A deep convolutional neural network approach is presented that provides a fully automated pipeline for face detection, tracking, and recognition of wild chimpanzees from long-term video records, and generates co-occurrence matrices to trace changes in the social network structure of an aging population.
References
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Journal Article

R: A language and environment for statistical computing.

R Core Team
- 01 Jan 2014 - 
TL;DR: Copyright (©) 1999–2012 R Foundation for Statistical Computing; permission is granted to make and distribute verbatim copies of this manual provided the copyright notice and permission notice are preserved on all copies.
Journal ArticleDOI

The Strength of Weak Ties

TL;DR: In this paper, it is argued that the degree of overlap of two individuals' friendship networks varies directly with the strength of their tie to one another, and the impact of this principle on diffusion of influence and information, mobility opportunity, and community organization is explored.
Journal ArticleDOI

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

TL;DR: Several case studies of Cytoscape plug-ins are surveyed, including a search for interaction pathways correlating with changes in gene expression, a study of protein complexes involved in cellular recovery to DNA damage, inference of a combined physical/functional interaction network for Halobacterium, and an interface to detailed stochastic/kinetic gene regulatory models.
Book

Social Network Analysis: Methods and Applications

TL;DR: This paper presents mathematical representation of social networks in the social and behavioral sciences through the lens of Dyadic and Triadic Interaction Models, which describes the relationships between actor and group measures and the structure of networks.
Journal ArticleDOI

Observational study of behavior: sampling methods.

TL;DR: Seven major types of sampling for observational studies of social behavior have been found in the literature and the major strengths and weaknesses of each method are pointed out.